Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Crnkl1P63154 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.32■□□□□ 0.52
Crnkl1P63154 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Crnkl1P63154 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Crnkl1P63154 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.31■□□□□ 0.52
Crnkl1P63154 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Crnkl1P63154 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.31■□□□□ 0.52
Crnkl1P63154 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Crnkl1P63154 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Crnkl1P63154 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.31■□□□□ 0.52
Crnkl1P63154 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Crnkl1P63154 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Crnkl1P63154 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.3■□□□□ 0.52
Crnkl1P63154 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Crnkl1P63154 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Crnkl1P63154 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Crnkl1P63154 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Crnkl1P63154 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Crnkl1P63154 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Crnkl1P63154 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Crnkl1P63154 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Crnkl1P63154 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Crnkl1P63154 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Crnkl1P63154 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Crnkl1P63154 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.29■□□□□ 0.52
Crnkl1P63154 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Crnkl1P63154 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Crnkl1P63154 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Crnkl1P63154 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Crnkl1P63154 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Crnkl1P63154 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Crnkl1P63154 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Crnkl1P63154 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Crnkl1P63154 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.29■□□□□ 0.52
Crnkl1P63154 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Crnkl1P63154 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Crnkl1P63154 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Crnkl1P63154 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Crnkl1P63154 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Crnkl1P63154 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.28■□□□□ 0.52
Crnkl1P63154 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Crnkl1P63154 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Crnkl1P63154 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Crnkl1P63154 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Crnkl1P63154 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.28■□□□□ 0.52
Crnkl1P63154 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.28■□□□□ 0.52
Crnkl1P63154 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Crnkl1P63154 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Crnkl1P63154 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Crnkl1P63154 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Crnkl1P63154 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Crnkl1P63154 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Crnkl1P63154 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Crnkl1P63154 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Crnkl1P63154 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Crnkl1P63154 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Crnkl1P63154 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Crnkl1P63154 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Crnkl1P63154 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Crnkl1P63154 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Crnkl1P63154 AA386476-201ENSMUST00000098781 1665 ntBASIC18.27■□□□□ 0.52
Crnkl1P63154 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Crnkl1P63154 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Crnkl1P63154 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Crnkl1P63154 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Crnkl1P63154 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Crnkl1P63154 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Crnkl1P63154 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Crnkl1P63154 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Crnkl1P63154 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Crnkl1P63154 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Crnkl1P63154 Gm21956-201ENSMUST00000179946 522 ntBASIC18.26■□□□□ 0.51
Crnkl1P63154 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.26■□□□□ 0.51
Crnkl1P63154 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Crnkl1P63154 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Crnkl1P63154 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Crnkl1P63154 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Crnkl1P63154 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Crnkl1P63154 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Crnkl1P63154 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Crnkl1P63154 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Crnkl1P63154 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Crnkl1P63154 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.26■□□□□ 0.51
Crnkl1P63154 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Crnkl1P63154 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Crnkl1P63154 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Crnkl1P63154 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Crnkl1P63154 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.25■□□□□ 0.51
Crnkl1P63154 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Crnkl1P63154 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Crnkl1P63154 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.25■□□□□ 0.51
Crnkl1P63154 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Crnkl1P63154 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Crnkl1P63154 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Crnkl1P63154 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Crnkl1P63154 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Crnkl1P63154 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.25■□□□□ 0.51
Crnkl1P63154 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Crnkl1P63154 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Crnkl1P63154 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms