Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a1P61620 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sec61a1P61620 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a1P61620 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a1P61620 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a1P61620 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a1P61620 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Sec61a1P61620 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a1P61620 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a1P61620 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.29■□□□□ 0.2
Sec61a1P61620 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a1P61620 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a1P61620 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a1P61620 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a1P61620 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.29■□□□□ 0.2
Sec61a1P61620 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sec61a1P61620 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a1P61620 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a1P61620 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a1P61620 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.28■□□□□ 0.2
Sec61a1P61620 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a1P61620 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.28■□□□□ 0.2
Sec61a1P61620 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a1P61620 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a1P61620 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a1P61620 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a1P61620 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Sec61a1P61620 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a1P61620 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a1P61620 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a1P61620 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a1P61620 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.27■□□□□ 0.2
Sec61a1P61620 Gm8495-201ENSMUST00000188740 694 ntBASIC16.27■□□□□ 0.2
Sec61a1P61620 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a1P61620 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a1P61620 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a1P61620 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sec61a1P61620 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.27■□□□□ 0.2
Sec61a1P61620 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a1P61620 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Sec61a1P61620 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Sec61a1P61620 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sec61a1P61620 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sec61a1P61620 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sec61a1P61620 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a1P61620 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a1P61620 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a1P61620 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a1P61620 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Sec61a1P61620 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sec61a1P61620 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a1P61620 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Sec61a1P61620 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a1P61620 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a1P61620 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a1P61620 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a1P61620 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a1P61620 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sec61a1P61620 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a1P61620 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a1P61620 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Sec61a1P61620 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a1P61620 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a1P61620 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a1P61620 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.25■□□□□ 0.19
Sec61a1P61620 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.25■□□□□ 0.19
Sec61a1P61620 Gm11421-201ENSMUST00000122124 294 ntBASIC16.25■□□□□ 0.19
Sec61a1P61620 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a1P61620 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.25■□□□□ 0.19
Sec61a1P61620 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.25■□□□□ 0.19
Sec61a1P61620 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Sec61a1P61620 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a1P61620 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a1P61620 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a1P61620 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a1P61620 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.25■□□□□ 0.19
Sec61a1P61620 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.25■□□□□ 0.19
Sec61a1P61620 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a1P61620 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a1P61620 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a1P61620 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sec61a1P61620 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sec61a1P61620 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sec61a1P61620 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sec61a1P61620 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Sec61a1P61620 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Sec61a1P61620 Gm5874-201ENSMUST00000096101 508 ntBASIC16.24■□□□□ 0.19
Sec61a1P61620 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sec61a1P61620 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sec61a1P61620 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.24■□□□□ 0.19
Sec61a1P61620 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Sec61a1P61620 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sec61a1P61620 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Sec61a1P61620 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.23■□□□□ 0.19
Sec61a1P61620 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sec61a1P61620 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Sec61a1P61620 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.23■□□□□ 0.19
Sec61a1P61620 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sec61a1P61620 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sec61a1P61620 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms