Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup43P59235 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup43P59235 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.51■□□□□ 0.39
Nup43P59235 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nup43P59235 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup43P59235 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nup43P59235 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.51■□□□□ 0.39
Nup43P59235 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Nup43P59235 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.51■□□□□ 0.39
Nup43P59235 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup43P59235 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup43P59235 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup43P59235 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup43P59235 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup43P59235 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup43P59235 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup43P59235 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup43P59235 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.5■□□□□ 0.39
Nup43P59235 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.5■□□□□ 0.39
Nup43P59235 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup43P59235 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Nup43P59235 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Nup43P59235 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup43P59235 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nup43P59235 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup43P59235 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup43P59235 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.5■□□□□ 0.39
Nup43P59235 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nup43P59235 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nup43P59235 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Nup43P59235 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup43P59235 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.5■□□□□ 0.39
Nup43P59235 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup43P59235 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup43P59235 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Nup43P59235 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup43P59235 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup43P59235 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.49■□□□□ 0.39
Nup43P59235 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Nup43P59235 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup43P59235 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup43P59235 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nup43P59235 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup43P59235 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Nup43P59235 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nup43P59235 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.48■□□□□ 0.39
Nup43P59235 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup43P59235 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.48■□□□□ 0.39
Nup43P59235 Gm7290-201ENSMUST00000104990 617 ntBASIC17.48■□□□□ 0.39
Nup43P59235 Gm12918-201ENSMUST00000120234 636 ntBASIC17.48■□□□□ 0.39
Nup43P59235 Gm15710-201ENSMUST00000121821 636 ntBASIC17.48■□□□□ 0.39
Nup43P59235 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup43P59235 Gm5075-201ENSMUST00000196916 622 ntBASIC17.48■□□□□ 0.39
Nup43P59235 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup43P59235 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.48■□□□□ 0.39
Nup43P59235 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.48■□□□□ 0.39
Nup43P59235 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup43P59235 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nup43P59235 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Nup43P59235 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.47■□□□□ 0.39
Nup43P59235 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup43P59235 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nup43P59235 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup43P59235 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.47■□□□□ 0.39
Nup43P59235 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nup43P59235 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nup43P59235 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.47■□□□□ 0.39
Nup43P59235 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.47■□□□□ 0.39
Nup43P59235 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup43P59235 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nup43P59235 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup43P59235 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup43P59235 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nup43P59235 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nup43P59235 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup43P59235 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup43P59235 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.46■□□□□ 0.39
Nup43P59235 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nup43P59235 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup43P59235 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup43P59235 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup43P59235 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.46■□□□□ 0.39
Nup43P59235 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup43P59235 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nup43P59235 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.46■□□□□ 0.39
Nup43P59235 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup43P59235 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup43P59235 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup43P59235 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup43P59235 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup43P59235 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nup43P59235 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nup43P59235 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nup43P59235 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nup43P59235 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nup43P59235 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.45■□□□□ 0.38
Nup43P59235 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup43P59235 Gm12933-201ENSMUST00000120203 872 ntBASIC17.45■□□□□ 0.38
Nup43P59235 Mir5133-201ENSMUST00000174955 77 ntBASIC17.45■□□□□ 0.38
Nup43P59235 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms