Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh11P55288 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh11P55288 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh11P55288 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh11P55288 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Cdh11P55288 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh11P55288 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cdh11P55288 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cdh11P55288 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh11P55288 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh11P55288 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.86■□□□□ 0.29
Cdh11P55288 Gm42569-201ENSMUST00000200539 472 ntBASIC16.86■□□□□ 0.29
Cdh11P55288 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cdh11P55288 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.86■□□□□ 0.29
Cdh11P55288 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cdh11P55288 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh11P55288 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh11P55288 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.86■□□□□ 0.29
Cdh11P55288 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh11P55288 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh11P55288 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh11P55288 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh11P55288 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh11P55288 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh11P55288 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh11P55288 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.85■□□□□ 0.29
Cdh11P55288 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cdh11P55288 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh11P55288 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Cdh11P55288 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh11P55288 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh11P55288 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh11P55288 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh11P55288 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh11P55288 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh11P55288 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh11P55288 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh11P55288 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh11P55288 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Cdh11P55288 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Cdh11P55288 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh11P55288 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdh11P55288 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.84■□□□□ 0.29
Cdh11P55288 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 Gm42642-201ENSMUST00000200683 355 ntBASIC16.84■□□□□ 0.29
Cdh11P55288 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.84■□□□□ 0.29
Cdh11P55288 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.84■□□□□ 0.29
Cdh11P55288 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.84■□□□□ 0.29
Cdh11P55288 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cdh11P55288 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdh11P55288 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Cdh11P55288 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdh11P55288 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh11P55288 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.83■□□□□ 0.28
Cdh11P55288 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cdh11P55288 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cdh11P55288 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Cdh11P55288 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh11P55288 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.83■□□□□ 0.28
Cdh11P55288 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh11P55288 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh11P55288 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh11P55288 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.83■□□□□ 0.28
Cdh11P55288 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh11P55288 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh11P55288 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh11P55288 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh11P55288 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh11P55288 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdh11P55288 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh11P55288 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh11P55288 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.82■□□□□ 0.28
Cdh11P55288 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh11P55288 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh11P55288 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.82■□□□□ 0.28
Cdh11P55288 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh11P55288 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh11P55288 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh11P55288 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.82■□□□□ 0.28
Cdh11P55288 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh11P55288 Gm18671-201ENSMUST00000214826 683 ntBASIC16.82■□□□□ 0.28
Cdh11P55288 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh11P55288 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh11P55288 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms