Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NrlP54846 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
NrlP54846 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.72■□□□□ 0.75
NrlP54846 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NrlP54846 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NrlP54846 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NrlP54846 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NrlP54846 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.72■□□□□ 0.75
NrlP54846 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.72■□□□□ 0.75
NrlP54846 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NrlP54846 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.72■□□□□ 0.75
NrlP54846 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NrlP54846 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NrlP54846 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.72■□□□□ 0.75
NrlP54846 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NrlP54846 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NrlP54846 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NrlP54846 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NrlP54846 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NrlP54846 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NrlP54846 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NrlP54846 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NrlP54846 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NrlP54846 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NrlP54846 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NrlP54846 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NrlP54846 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NrlP54846 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.71■□□□□ 0.75
NrlP54846 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
NrlP54846 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NrlP54846 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NrlP54846 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NrlP54846 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NrlP54846 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NrlP54846 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
NrlP54846 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.7■□□□□ 0.74
NrlP54846 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NrlP54846 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.69■□□□□ 0.74
NrlP54846 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NrlP54846 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.69■□□□□ 0.74
NrlP54846 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
NrlP54846 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NrlP54846 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NrlP54846 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
NrlP54846 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NrlP54846 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.68■□□□□ 0.74
NrlP54846 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.68■□□□□ 0.74
NrlP54846 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
NrlP54846 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NrlP54846 Gm2399-201ENSMUST00000104944 225 ntBASIC19.68■□□□□ 0.74
NrlP54846 Gm715-201ENSMUST00000117865 831 ntBASIC19.68■□□□□ 0.74
NrlP54846 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NrlP54846 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.68■□□□□ 0.74
NrlP54846 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.68■□□□□ 0.74
NrlP54846 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NrlP54846 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NrlP54846 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.68■□□□□ 0.74
NrlP54846 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NrlP54846 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NrlP54846 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NrlP54846 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NrlP54846 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.67■□□□□ 0.74
NrlP54846 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NrlP54846 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NrlP54846 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NrlP54846 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.67■□□□□ 0.74
NrlP54846 Gm10698-201ENSMUST00000182663 604 ntBASIC19.67■□□□□ 0.74
NrlP54846 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.67■□□□□ 0.74
NrlP54846 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.67■□□□□ 0.74
NrlP54846 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NrlP54846 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
NrlP54846 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NrlP54846 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NrlP54846 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NrlP54846 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NrlP54846 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NrlP54846 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.67■□□□□ 0.74
NrlP54846 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NrlP54846 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NrlP54846 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NrlP54846 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NrlP54846 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NrlP54846 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NrlP54846 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
NrlP54846 Gm13836-201ENSMUST00000121159 501 ntBASIC19.66■□□□□ 0.74
NrlP54846 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.66■□□□□ 0.74
NrlP54846 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NrlP54846 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.66■□□□□ 0.74
NrlP54846 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NrlP54846 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NrlP54846 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NrlP54846 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
NrlP54846 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NrlP54846 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NrlP54846 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NrlP54846 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NrlP54846 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NrlP54846 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NrlP54846 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NrlP54846 Gm15378-201ENSMUST00000121894 207 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms