Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atxn1P54254 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atxn1P54254 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atxn1P54254 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atxn1P54254 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atxn1P54254 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atxn1P54254 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atxn1P54254 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atxn1P54254 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atxn1P54254 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atxn1P54254 Gm7367-201ENSMUST00000057611 492 ntBASIC18.38■□□□□ 0.53
Atxn1P54254 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
Atxn1P54254 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.38■□□□□ 0.53
Atxn1P54254 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.38■□□□□ 0.53
Atxn1P54254 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atxn1P54254 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Atxn1P54254 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Atxn1P54254 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Atxn1P54254 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atxn1P54254 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atxn1P54254 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atxn1P54254 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atxn1P54254 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atxn1P54254 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atxn1P54254 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atxn1P54254 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.37■□□□□ 0.53
Atxn1P54254 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Atxn1P54254 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atxn1P54254 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Atxn1P54254 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atxn1P54254 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atxn1P54254 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atxn1P54254 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Atxn1P54254 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.37■□□□□ 0.53
Atxn1P54254 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atxn1P54254 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Atxn1P54254 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atxn1P54254 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atxn1P54254 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atxn1P54254 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atxn1P54254 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atxn1P54254 Gm27741-201ENSMUST00000185060 237 ntBASIC18.36■□□□□ 0.53
Atxn1P54254 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.36■□□□□ 0.53
Atxn1P54254 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.36■□□□□ 0.53
Atxn1P54254 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atxn1P54254 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atxn1P54254 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atxn1P54254 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atxn1P54254 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Atxn1P54254 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atxn1P54254 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atxn1P54254 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atxn1P54254 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Atxn1P54254 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atxn1P54254 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atxn1P54254 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atxn1P54254 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atxn1P54254 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atxn1P54254 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atxn1P54254 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atxn1P54254 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atxn1P54254 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atxn1P54254 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atxn1P54254 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atxn1P54254 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atxn1P54254 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Atxn1P54254 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atxn1P54254 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.34■□□□□ 0.53
Atxn1P54254 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.34■□□□□ 0.53
Atxn1P54254 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atxn1P54254 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.34■□□□□ 0.53
Atxn1P54254 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atxn1P54254 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Atxn1P54254 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Atxn1P54254 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Atxn1P54254 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atxn1P54254 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Atxn1P54254 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Atxn1P54254 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atxn1P54254 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Atxn1P54254 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atxn1P54254 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atxn1P54254 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atxn1P54254 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atxn1P54254 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atxn1P54254 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atxn1P54254 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atxn1P54254 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atxn1P54254 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atxn1P54254 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Atxn1P54254 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Atxn1P54254 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.32■□□□□ 0.52
Atxn1P54254 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.32■□□□□ 0.52
Atxn1P54254 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Atxn1P54254 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Atxn1P54254 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atxn1P54254 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atxn1P54254 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atxn1P54254 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atxn1P54254 Mir5122-201ENSMUST00000175004 89 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms