Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Gm2399-201ENSMUST00000104944 225 ntBASIC18.15■□□□□ 0.5
Limk1P53668 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Limk1P53668 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.15■□□□□ 0.5
Limk1P53668 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Limk1P53668 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Limk1P53668 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Limk1P53668 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Limk1P53668 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Limk1P53668 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Limk1P53668 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.14■□□□□ 0.49
Limk1P53668 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Limk1P53668 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Limk1P53668 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Limk1P53668 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Limk1P53668 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Limk1P53668 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Limk1P53668 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Limk1P53668 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Limk1P53668 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.13■□□□□ 0.49
Limk1P53668 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Limk1P53668 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Limk1P53668 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Limk1P53668 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Limk1P53668 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Limk1P53668 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Limk1P53668 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Limk1P53668 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Limk1P53668 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Limk1P53668 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Limk1P53668 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.12■□□□□ 0.49
Limk1P53668 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.12■□□□□ 0.49
Limk1P53668 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Limk1P53668 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Limk1P53668 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Limk1P53668 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Limk1P53668 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Limk1P53668 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Limk1P53668 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Limk1P53668 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.11■□□□□ 0.49
Limk1P53668 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Limk1P53668 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Limk1P53668 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Limk1P53668 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Limk1P53668 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.11■□□□□ 0.49
Limk1P53668 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Limk1P53668 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.11■□□□□ 0.49
Limk1P53668 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Limk1P53668 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Limk1P53668 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Limk1P53668 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Limk1P53668 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.11■□□□□ 0.49
Limk1P53668 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Limk1P53668 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Limk1P53668 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Limk1P53668 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Limk1P53668 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Limk1P53668 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Limk1P53668 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.1■□□□□ 0.49
Limk1P53668 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Limk1P53668 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Limk1P53668 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.1■□□□□ 0.49
Limk1P53668 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.1■□□□□ 0.49
Limk1P53668 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Limk1P53668 Gm5417-201ENSMUST00000079706 384 ntBASIC18.1■□□□□ 0.49
Limk1P53668 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Limk1P53668 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Limk1P53668 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.1■□□□□ 0.49
Limk1P53668 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Limk1P53668 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Limk1P53668 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Limk1P53668 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk1P53668 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk1P53668 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk1P53668 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk1P53668 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk1P53668 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Limk1P53668 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk1P53668 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk1P53668 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk1P53668 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Limk1P53668 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk1P53668 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk1P53668 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk1P53668 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.09■□□□□ 0.49
Limk1P53668 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk1P53668 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk1P53668 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Limk1P53668 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Limk1P53668 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Limk1P53668 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Limk1P53668 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.08■□□□□ 0.48
Limk1P53668 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Limk1P53668 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Limk1P53668 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Limk1P53668 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Limk1P53668 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Limk1P53668 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Limk1P53668 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Limk1P53668 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Limk1P53668 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms