Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Atp6v1aP50516 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Atp6v1aP50516 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Atp6v1aP50516 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Atp6v1aP50516 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Atp6v1aP50516 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC22.33■■□□□ 1.17
Atp6v1aP50516 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC22.33■■□□□ 1.17
Atp6v1aP50516 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Atp6v1aP50516 Mtag2-201ENSMUST00000058665 714 ntBASIC22.33■■□□□ 1.17
Atp6v1aP50516 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Atp6v1aP50516 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Atp6v1aP50516 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Atp6v1aP50516 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Atp6v1aP50516 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Atp6v1aP50516 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Atp6v1aP50516 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Atp6v1aP50516 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC22.32■■□□□ 1.16
Atp6v1aP50516 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Atp6v1aP50516 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Atp6v1aP50516 Gm43799-201ENSMUST00000201845 579 ntBASIC22.32■■□□□ 1.16
Atp6v1aP50516 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Atp6v1aP50516 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Atp6v1aP50516 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
Atp6v1aP50516 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Atp6v1aP50516 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Atp6v1aP50516 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Atp6v1aP50516 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Atp6v1aP50516 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Atp6v1aP50516 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Atp6v1aP50516 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC22.31■■□□□ 1.16
Atp6v1aP50516 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Atp6v1aP50516 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
Atp6v1aP50516 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Atp6v1aP50516 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Atp6v1aP50516 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Atp6v1aP50516 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Atp6v1aP50516 AC175538.1-201ENSMUST00000225343 1269 ntBASIC22.31■■□□□ 1.16
Atp6v1aP50516 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Atp6v1aP50516 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Atp6v1aP50516 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Atp6v1aP50516 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Atp6v1aP50516 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Atp6v1aP50516 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Atp6v1aP50516 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
Atp6v1aP50516 Gm6433-201ENSMUST00000118634 875 ntBASIC22.3■■□□□ 1.16
Atp6v1aP50516 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC22.3■■□□□ 1.16
Atp6v1aP50516 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Atp6v1aP50516 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Atp6v1aP50516 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Atp6v1aP50516 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Atp6v1aP50516 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Atp6v1aP50516 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Atp6v1aP50516 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Atp6v1aP50516 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Atp6v1aP50516 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Atp6v1aP50516 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Atp6v1aP50516 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Atp6v1aP50516 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Atp6v1aP50516 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Atp6v1aP50516 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC22.28■■□□□ 1.16
Atp6v1aP50516 Gm10231-201ENSMUST00000181584 441 ntBASIC22.28■■□□□ 1.16
Atp6v1aP50516 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Atp6v1aP50516 Gm10175-202ENSMUST00000208752 441 ntBASIC22.28■■□□□ 1.16
Atp6v1aP50516 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Atp6v1aP50516 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Atp6v1aP50516 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Atp6v1aP50516 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Atp6v1aP50516 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
Atp6v1aP50516 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC22.27■■□□□ 1.16
Atp6v1aP50516 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Atp6v1aP50516 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Atp6v1aP50516 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Atp6v1aP50516 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC22.27■■□□□ 1.16
Atp6v1aP50516 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Atp6v1aP50516 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Atp6v1aP50516 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Atp6v1aP50516 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Atp6v1aP50516 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Atp6v1aP50516 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Atp6v1aP50516 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Atp6v1aP50516 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Atp6v1aP50516 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Atp6v1aP50516 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Atp6v1aP50516 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Atp6v1aP50516 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
Atp6v1aP50516 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC22.26■■□□□ 1.15
Atp6v1aP50516 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC22.26■■□□□ 1.15
Atp6v1aP50516 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC22.26■■□□□ 1.15
Atp6v1aP50516 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC22.26■■□□□ 1.15
Atp6v1aP50516 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Atp6v1aP50516 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Atp6v1aP50516 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Atp6v1aP50516 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Atp6v1aP50516 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Atp6v1aP50516 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Atp6v1aP50516 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Atp6v1aP50516 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
Atp6v1aP50516 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Atp6v1aP50516 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Atp6v1aP50516 Gm43183-201ENSMUST00000200632 547 ntBASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms