Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.86■□□□□ 0.61
Lhx3P50481 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx3P50481 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Lhx3P50481 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx3P50481 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx3P50481 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Lhx3P50481 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx3P50481 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx3P50481 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx3P50481 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx3P50481 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Lhx3P50481 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx3P50481 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx3P50481 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx3P50481 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.85■□□□□ 0.61
Lhx3P50481 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.85■□□□□ 0.61
Lhx3P50481 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx3P50481 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.85■□□□□ 0.61
Lhx3P50481 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.84■□□□□ 0.61
Lhx3P50481 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx3P50481 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.84■□□□□ 0.61
Lhx3P50481 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx3P50481 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Lhx3P50481 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.84■□□□□ 0.61
Lhx3P50481 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx3P50481 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx3P50481 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.84■□□□□ 0.61
Lhx3P50481 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Lhx3P50481 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx3P50481 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx3P50481 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx3P50481 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx3P50481 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx3P50481 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.84■□□□□ 0.61
Lhx3P50481 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx3P50481 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx3P50481 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx3P50481 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.83■□□□□ 0.61
Lhx3P50481 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Lhx3P50481 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lhx3P50481 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Lhx3P50481 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.83■□□□□ 0.6
Lhx3P50481 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Lhx3P50481 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.83■□□□□ 0.6
Lhx3P50481 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.83■□□□□ 0.6
Lhx3P50481 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lhx3P50481 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Lhx3P50481 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lhx3P50481 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lhx3P50481 Golph3-205ENSMUST00000228671 2842 ntBASIC18.83■□□□□ 0.6
Lhx3P50481 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lhx3P50481 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lhx3P50481 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lhx3P50481 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lhx3P50481 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lhx3P50481 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lhx3P50481 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.82■□□□□ 0.6
Lhx3P50481 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx3P50481 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx3P50481 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx3P50481 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.82■□□□□ 0.6
Lhx3P50481 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Lhx3P50481 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx3P50481 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx3P50481 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Lhx3P50481 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx3P50481 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx3P50481 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx3P50481 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lhx3P50481 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lhx3P50481 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx3P50481 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx3P50481 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx3P50481 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.81■□□□□ 0.6
Lhx3P50481 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.81■□□□□ 0.6
Lhx3P50481 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx3P50481 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx3P50481 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx3P50481 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx3P50481 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx3P50481 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lhx3P50481 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Lhx3P50481 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx3P50481 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lhx3P50481 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx3P50481 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx3P50481 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx3P50481 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx3P50481 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx3P50481 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Lhx3P50481 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lhx3P50481 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Lhx3P50481 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Lhx3P50481 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.79■□□□□ 0.6
Lhx3P50481 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx3P50481 Gm22325-201ENSMUST00000158904 308 ntBASIC18.79■□□□□ 0.6
Lhx3P50481 Gm44549-201ENSMUST00000208351 577 ntBASIC18.79■□□□□ 0.6
Lhx3P50481 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.79■□□□□ 0.6
Lhx3P50481 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.79■□□□□ 0.6
Lhx3P50481 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms