Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rph3aP47708 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rph3aP47708 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rph3aP47708 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rph3aP47708 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rph3aP47708 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rph3aP47708 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rph3aP47708 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rph3aP47708 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rph3aP47708 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rph3aP47708 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rph3aP47708 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rph3aP47708 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rph3aP47708 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rph3aP47708 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.81■□□□□ 0.44
Rph3aP47708 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rph3aP47708 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rph3aP47708 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rph3aP47708 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Rph3aP47708 Gm42569-201ENSMUST00000200539 472 ntBASIC17.81■□□□□ 0.44
Rph3aP47708 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.81■□□□□ 0.44
Rph3aP47708 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.81■□□□□ 0.44
Rph3aP47708 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rph3aP47708 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rph3aP47708 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rph3aP47708 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.81■□□□□ 0.44
Rph3aP47708 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.81■□□□□ 0.44
Rph3aP47708 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rph3aP47708 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rph3aP47708 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.8■□□□□ 0.44
Rph3aP47708 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rph3aP47708 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rph3aP47708 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rph3aP47708 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.8■□□□□ 0.44
Rph3aP47708 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.8■□□□□ 0.44
Rph3aP47708 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rph3aP47708 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rph3aP47708 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.8■□□□□ 0.44
Rph3aP47708 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rph3aP47708 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.79■□□□□ 0.44
Rph3aP47708 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rph3aP47708 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rph3aP47708 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rph3aP47708 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rph3aP47708 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rph3aP47708 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rph3aP47708 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rph3aP47708 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rph3aP47708 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rph3aP47708 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rph3aP47708 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rph3aP47708 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.79■□□□□ 0.44
Rph3aP47708 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rph3aP47708 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rph3aP47708 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Rph3aP47708 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.78■□□□□ 0.44
Rph3aP47708 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rph3aP47708 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rph3aP47708 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rph3aP47708 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rph3aP47708 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rph3aP47708 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rph3aP47708 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rph3aP47708 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rph3aP47708 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rph3aP47708 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rph3aP47708 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rph3aP47708 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rph3aP47708 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rph3aP47708 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rph3aP47708 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.77■□□□□ 0.44
Rph3aP47708 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.77■□□□□ 0.44
Rph3aP47708 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rph3aP47708 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rph3aP47708 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rph3aP47708 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rph3aP47708 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rph3aP47708 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rph3aP47708 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rph3aP47708 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rph3aP47708 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rph3aP47708 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rph3aP47708 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rph3aP47708 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rph3aP47708 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rph3aP47708 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rph3aP47708 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.76■□□□□ 0.43
Rph3aP47708 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rph3aP47708 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rph3aP47708 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rph3aP47708 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rph3aP47708 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.76■□□□□ 0.43
Rph3aP47708 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rph3aP47708 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.76■□□□□ 0.43
Rph3aP47708 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rph3aP47708 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rph3aP47708 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rph3aP47708 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rph3aP47708 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rph3aP47708 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 151.9 ms