Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4bP46467 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vps4bP46467 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vps4bP46467 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vps4bP46467 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps4bP46467 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Vps4bP46467 Gm43060-201ENSMUST00000200621 289 ntBASIC18.79■□□□□ 0.6
Vps4bP46467 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps4bP46467 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps4bP46467 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps4bP46467 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps4bP46467 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps4bP46467 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps4bP46467 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps4bP46467 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps4bP46467 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps4bP46467 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Vps4bP46467 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Vps4bP46467 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Vps4bP46467 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps4bP46467 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Vps4bP46467 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps4bP46467 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps4bP46467 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.77■□□□□ 0.6
Vps4bP46467 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.77■□□□□ 0.6
Vps4bP46467 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps4bP46467 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps4bP46467 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps4bP46467 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps4bP46467 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps4bP46467 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps4bP46467 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.77■□□□□ 0.6
Vps4bP46467 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.77■□□□□ 0.6
Vps4bP46467 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps4bP46467 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Vps4bP46467 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps4bP46467 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps4bP46467 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Vps4bP46467 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps4bP46467 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps4bP46467 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Vps4bP46467 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.76■□□□□ 0.59
Vps4bP46467 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps4bP46467 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps4bP46467 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.76■□□□□ 0.59
Vps4bP46467 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps4bP46467 Gm5874-201ENSMUST00000096101 508 ntBASIC18.76■□□□□ 0.59
Vps4bP46467 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps4bP46467 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps4bP46467 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps4bP46467 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.76■□□□□ 0.59
Vps4bP46467 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps4bP46467 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.76■□□□□ 0.59
Vps4bP46467 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps4bP46467 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Vps4bP46467 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps4bP46467 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.75■□□□□ 0.59
Vps4bP46467 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps4bP46467 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps4bP46467 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Vps4bP46467 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps4bP46467 Gm38205-201ENSMUST00000192243 258 ntBASIC18.75■□□□□ 0.59
Vps4bP46467 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps4bP46467 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps4bP46467 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps4bP46467 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Vps4bP46467 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps4bP46467 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps4bP46467 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps4bP46467 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps4bP46467 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps4bP46467 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps4bP46467 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Vps4bP46467 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps4bP46467 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Vps4bP46467 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.74■□□□□ 0.59
Vps4bP46467 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps4bP46467 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps4bP46467 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps4bP46467 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps4bP46467 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps4bP46467 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.74■□□□□ 0.59
Vps4bP46467 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.74■□□□□ 0.59
Vps4bP46467 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps4bP46467 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps4bP46467 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps4bP46467 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps4bP46467 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps4bP46467 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Vps4bP46467 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Vps4bP46467 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Vps4bP46467 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps4bP46467 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps4bP46467 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps4bP46467 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.73■□□□□ 0.59
Vps4bP46467 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps4bP46467 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps4bP46467 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.73■□□□□ 0.59
Vps4bP46467 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps4bP46467 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms