Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-6P43688 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-6P43688 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx2-6P43688 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx2-6P43688 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-6P43688 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-6P43688 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Nkx2-6P43688 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-6P43688 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-6P43688 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-6P43688 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-6P43688 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Nkx2-6P43688 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-6P43688 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.5■□□□□ 0.39
Nkx2-6P43688 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.5■□□□□ 0.39
Nkx2-6P43688 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-6P43688 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nkx2-6P43688 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-6P43688 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nkx2-6P43688 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-6P43688 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-6P43688 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-6P43688 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Nkx2-6P43688 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-6P43688 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-6P43688 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Nkx2-6P43688 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-6P43688 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.49■□□□□ 0.39
Nkx2-6P43688 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-6P43688 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-6P43688 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-6P43688 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.49■□□□□ 0.39
Nkx2-6P43688 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-6P43688 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-6P43688 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.48■□□□□ 0.39
Nkx2-6P43688 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.48■□□□□ 0.39
Nkx2-6P43688 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.48■□□□□ 0.39
Nkx2-6P43688 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nkx2-6P43688 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.48■□□□□ 0.39
Nkx2-6P43688 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.48■□□□□ 0.39
Nkx2-6P43688 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Nkx2-6P43688 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.47■□□□□ 0.39
Nkx2-6P43688 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-6P43688 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-6P43688 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-6P43688 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.47■□□□□ 0.39
Nkx2-6P43688 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-6P43688 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-6P43688 Gm18666-201ENSMUST00000190039 958 ntBASIC17.47■□□□□ 0.39
Nkx2-6P43688 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.47■□□□□ 0.39
Nkx2-6P43688 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nkx2-6P43688 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-6P43688 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-6P43688 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nkx2-6P43688 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-6P43688 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-6P43688 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-6P43688 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-6P43688 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.47■□□□□ 0.39
Nkx2-6P43688 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx2-6P43688 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-6P43688 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-6P43688 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-6P43688 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-6P43688 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-6P43688 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nkx2-6P43688 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-6P43688 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-6P43688 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-6P43688 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-6P43688 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.45■□□□□ 0.38
Nkx2-6P43688 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-6P43688 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-6P43688 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nkx2-6P43688 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-6P43688 Golph3-205ENSMUST00000228671 2842 ntBASIC17.45■□□□□ 0.38
Nkx2-6P43688 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.45■□□□□ 0.38
Nkx2-6P43688 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-6P43688 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-6P43688 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Gm11249-201ENSMUST00000117071 859 ntBASIC17.44■□□□□ 0.38
Nkx2-6P43688 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-6P43688 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-6P43688 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms