Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Msh2P43247 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Msh2P43247 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh2P43247 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.08■□□□□ 0.64
Msh2P43247 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.08■□□□□ 0.64
Msh2P43247 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Msh2P43247 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.08■□□□□ 0.64
Msh2P43247 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Msh2P43247 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh2P43247 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh2P43247 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Msh2P43247 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh2P43247 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Msh2P43247 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh2P43247 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Msh2P43247 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh2P43247 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh2P43247 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Msh2P43247 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh2P43247 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh2P43247 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh2P43247 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh2P43247 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh2P43247 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.07■□□□□ 0.64
Msh2P43247 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh2P43247 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh2P43247 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh2P43247 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Msh2P43247 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh2P43247 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh2P43247 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh2P43247 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh2P43247 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh2P43247 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Msh2P43247 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Msh2P43247 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Msh2P43247 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.06■□□□□ 0.64
Msh2P43247 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Msh2P43247 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh2P43247 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.05■□□□□ 0.64
Msh2P43247 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh2P43247 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Msh2P43247 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
Msh2P43247 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Msh2P43247 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.05■□□□□ 0.64
Msh2P43247 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Msh2P43247 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh2P43247 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Msh2P43247 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Msh2P43247 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Msh2P43247 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh2P43247 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh2P43247 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh2P43247 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh2P43247 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.04■□□□□ 0.64
Msh2P43247 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Msh2P43247 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
Msh2P43247 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Msh2P43247 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.04■□□□□ 0.64
Msh2P43247 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Msh2P43247 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Msh2P43247 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh2P43247 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh2P43247 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh2P43247 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh2P43247 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh2P43247 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Msh2P43247 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
Msh2P43247 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh2P43247 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh2P43247 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.03■□□□□ 0.64
Msh2P43247 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.03■□□□□ 0.64
Msh2P43247 Gm27801-201ENSMUST00000184174 223 ntBASIC19.03■□□□□ 0.64
Msh2P43247 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh2P43247 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh2P43247 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh2P43247 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Msh2P43247 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh2P43247 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Msh2P43247 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh2P43247 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh2P43247 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.02■□□□□ 0.64
Msh2P43247 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh2P43247 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Msh2P43247 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Msh2P43247 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Msh2P43247 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh2P43247 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh2P43247 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh2P43247 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Msh2P43247 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh2P43247 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Msh2P43247 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.01■□□□□ 0.63
Msh2P43247 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Msh2P43247 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh2P43247 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.01■□□□□ 0.63
Msh2P43247 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh2P43247 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh2P43247 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh2P43247 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms