Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gdf6P43028 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gdf6P43028 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.52■□□□□ 0.72
Gdf6P43028 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gdf6P43028 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gdf6P43028 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gdf6P43028 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gdf6P43028 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gdf6P43028 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.52■□□□□ 0.72
Gdf6P43028 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gdf6P43028 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.52■□□□□ 0.72
Gdf6P43028 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gdf6P43028 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gdf6P43028 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gdf6P43028 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gdf6P43028 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gdf6P43028 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gdf6P43028 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gdf6P43028 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Gdf6P43028 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gdf6P43028 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gdf6P43028 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Gdf6P43028 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gdf6P43028 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gdf6P43028 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gdf6P43028 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gdf6P43028 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gdf6P43028 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gdf6P43028 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gdf6P43028 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.5■□□□□ 0.71
Gdf6P43028 Gm10252-201ENSMUST00000209541 832 ntBASIC19.5■□□□□ 0.71
Gdf6P43028 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gdf6P43028 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gdf6P43028 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gdf6P43028 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gdf6P43028 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gdf6P43028 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gdf6P43028 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gdf6P43028 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gdf6P43028 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gdf6P43028 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gdf6P43028 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gdf6P43028 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gdf6P43028 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gdf6P43028 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.49■□□□□ 0.71
Gdf6P43028 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gdf6P43028 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
Gdf6P43028 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Gdf6P43028 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Gdf6P43028 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gdf6P43028 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Gdf6P43028 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gdf6P43028 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gdf6P43028 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gdf6P43028 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gdf6P43028 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Gdf6P43028 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gdf6P43028 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gdf6P43028 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.48■□□□□ 0.71
Gdf6P43028 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gdf6P43028 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gdf6P43028 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Gdf6P43028 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Gdf6P43028 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gdf6P43028 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Gdf6P43028 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gdf6P43028 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gdf6P43028 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gdf6P43028 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.46■□□□□ 0.71
Gdf6P43028 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gdf6P43028 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gdf6P43028 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gdf6P43028 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gdf6P43028 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gdf6P43028 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.46■□□□□ 0.71
Gdf6P43028 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.46■□□□□ 0.71
Gdf6P43028 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Gdf6P43028 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.46■□□□□ 0.71
Gdf6P43028 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gdf6P43028 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gdf6P43028 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gdf6P43028 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gdf6P43028 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gdf6P43028 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gdf6P43028 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gdf6P43028 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gdf6P43028 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gdf6P43028 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gdf6P43028 Gm22325-201ENSMUST00000158904 308 ntBASIC19.45■□□□□ 0.7
Gdf6P43028 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.45■□□□□ 0.7
Gdf6P43028 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.45■□□□□ 0.7
Gdf6P43028 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gdf6P43028 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gdf6P43028 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.45■□□□□ 0.7
Gdf6P43028 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gdf6P43028 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Gdf6P43028 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.45■□□□□ 0.7
Gdf6P43028 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gdf6P43028 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gdf6P43028 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms