Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.75■□□□□ 0.43
Tnfsf9P41274 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.75■□□□□ 0.43
Tnfsf9P41274 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Tnfsf9P41274 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Tnfsf9P41274 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfsf9P41274 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfsf9P41274 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfsf9P41274 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Tnfsf9P41274 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfsf9P41274 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfsf9P41274 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfsf9P41274 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfsf9P41274 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfsf9P41274 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.74■□□□□ 0.43
Tnfsf9P41274 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.74■□□□□ 0.43
Tnfsf9P41274 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfsf9P41274 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfsf9P41274 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tnfsf9P41274 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.74■□□□□ 0.43
Tnfsf9P41274 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.74■□□□□ 0.43
Tnfsf9P41274 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfsf9P41274 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Tnfsf9P41274 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfsf9P41274 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Tnfsf9P41274 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfsf9P41274 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfsf9P41274 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfsf9P41274 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.73■□□□□ 0.43
Tnfsf9P41274 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfsf9P41274 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf9P41274 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.72■□□□□ 0.43
Tnfsf9P41274 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.72■□□□□ 0.43
Tnfsf9P41274 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.72■□□□□ 0.43
Tnfsf9P41274 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Tnfsf9P41274 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfsf9P41274 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfsf9P41274 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Tnfsf9P41274 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Tnfsf9P41274 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Tnfsf9P41274 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfsf9P41274 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfsf9P41274 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfsf9P41274 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfsf9P41274 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.71■□□□□ 0.43
Tnfsf9P41274 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfsf9P41274 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Tnfsf9P41274 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tnfsf9P41274 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tnfsf9P41274 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfsf9P41274 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfsf9P41274 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfsf9P41274 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.7■□□□□ 0.42
Tnfsf9P41274 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfsf9P41274 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfsf9P41274 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfsf9P41274 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Tnfsf9P41274 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Tnfsf9P41274 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfsf9P41274 Gm8520-201ENSMUST00000186517 868 ntBASIC17.7■□□□□ 0.42
Tnfsf9P41274 Trmt13-210ENSMUST00000198454 880 ntBASIC17.7■□□□□ 0.42
Tnfsf9P41274 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Tnfsf9P41274 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfsf9P41274 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Tnfsf9P41274 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.7■□□□□ 0.42
Tnfsf9P41274 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfsf9P41274 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfsf9P41274 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tnfsf9P41274 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfsf9P41274 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfsf9P41274 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfsf9P41274 Gm37856-201ENSMUST00000191634 999 ntBASIC17.69■□□□□ 0.42
Tnfsf9P41274 Gm2559-201ENSMUST00000201323 363 ntBASIC17.69■□□□□ 0.42
Tnfsf9P41274 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tnfsf9P41274 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfsf9P41274 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.69■□□□□ 0.42
Tnfsf9P41274 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfsf9P41274 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfsf9P41274 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfsf9P41274 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfsf9P41274 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.68■□□□□ 0.42
Tnfsf9P41274 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.68■□□□□ 0.42
Tnfsf9P41274 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfsf9P41274 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms