Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox6P40645 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.37■□□□□ 0.37
Sox6P40645 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sox6P40645 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.37■□□□□ 0.37
Sox6P40645 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.37■□□□□ 0.37
Sox6P40645 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Sox6P40645 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sox6P40645 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox6P40645 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Sox6P40645 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox6P40645 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox6P40645 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox6P40645 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox6P40645 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sox6P40645 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Sox6P40645 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Gm43060-201ENSMUST00000200621 289 ntBASIC17.36■□□□□ 0.37
Sox6P40645 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.36■□□□□ 0.37
Sox6P40645 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox6P40645 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox6P40645 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sox6P40645 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sox6P40645 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox6P40645 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox6P40645 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Sox6P40645 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.35■□□□□ 0.37
Sox6P40645 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox6P40645 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox6P40645 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Sox6P40645 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox6P40645 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sox6P40645 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox6P40645 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox6P40645 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Sox6P40645 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Sox6P40645 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Sox6P40645 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Sox6P40645 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sox6P40645 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox6P40645 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox6P40645 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox6P40645 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sox6P40645 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox6P40645 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox6P40645 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sox6P40645 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sox6P40645 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox6P40645 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox6P40645 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sox6P40645 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox6P40645 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox6P40645 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox6P40645 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox6P40645 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Sox6P40645 Gm15039-201ENSMUST00000118914 875 ntBASIC17.33■□□□□ 0.36
Sox6P40645 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sox6P40645 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
Sox6P40645 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Sox6P40645 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox6P40645 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Sox6P40645 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sox6P40645 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.33■□□□□ 0.36
Sox6P40645 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.33■□□□□ 0.36
Sox6P40645 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox6P40645 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox6P40645 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox6P40645 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox6P40645 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sox6P40645 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
Sox6P40645 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.32■□□□□ 0.36
Sox6P40645 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.32■□□□□ 0.36
Sox6P40645 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox6P40645 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox6P40645 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox6P40645 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox6P40645 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox6P40645 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sox6P40645 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox6P40645 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox6P40645 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox6P40645 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox6P40645 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms