Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc1P35601 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.49■□□□□ 0.71
Rfc1P35601 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rfc1P35601 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Rfc1P35601 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc1P35601 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc1P35601 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc1P35601 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc1P35601 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc1P35601 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc1P35601 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc1P35601 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc1P35601 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc1P35601 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc1P35601 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
Rfc1P35601 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc1P35601 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc1P35601 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.48■□□□□ 0.71
Rfc1P35601 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc1P35601 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc1P35601 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc1P35601 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc1P35601 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc1P35601 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.47■□□□□ 0.71
Rfc1P35601 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc1P35601 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc1P35601 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc1P35601 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Rfc1P35601 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc1P35601 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc1P35601 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc1P35601 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc1P35601 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc1P35601 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc1P35601 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc1P35601 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc1P35601 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rfc1P35601 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc1P35601 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc1P35601 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc1P35601 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rfc1P35601 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc1P35601 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Rfc1P35601 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc1P35601 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.46■□□□□ 0.71
Rfc1P35601 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rfc1P35601 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.46■□□□□ 0.71
Rfc1P35601 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.46■□□□□ 0.71
Rfc1P35601 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc1P35601 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc1P35601 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc1P35601 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc1P35601 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc1P35601 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.46■□□□□ 0.71
Rfc1P35601 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfc1P35601 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfc1P35601 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfc1P35601 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.45■□□□□ 0.7
Rfc1P35601 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rfc1P35601 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rfc1P35601 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfc1P35601 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.45■□□□□ 0.7
Rfc1P35601 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfc1P35601 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rfc1P35601 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfc1P35601 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Rfc1P35601 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rfc1P35601 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfc1P35601 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfc1P35601 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rfc1P35601 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfc1P35601 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfc1P35601 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rfc1P35601 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfc1P35601 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Rfc1P35601 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.44■□□□□ 0.7
Rfc1P35601 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfc1P35601 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfc1P35601 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.44■□□□□ 0.7
Rfc1P35601 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfc1P35601 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfc1P35601 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfc1P35601 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Rfc1P35601 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfc1P35601 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rfc1P35601 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfc1P35601 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rfc1P35601 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfc1P35601 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfc1P35601 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfc1P35601 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfc1P35601 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfc1P35601 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfc1P35601 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Rfc1P35601 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfc1P35601 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfc1P35601 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rfc1P35601 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rfc1P35601 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfc1P35601 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms