Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp13P33435 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp13P33435 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp13P33435 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp13P33435 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.94■□□□□ 0.62
Mmp13P33435 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp13P33435 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp13P33435 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.93■□□□□ 0.62
Mmp13P33435 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp13P33435 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Mmp13P33435 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp13P33435 Gm9988-201ENSMUST00000069786 435 ntBASIC18.93■□□□□ 0.62
Mmp13P33435 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp13P33435 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.93■□□□□ 0.62
Mmp13P33435 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Mmp13P33435 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp13P33435 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp13P33435 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp13P33435 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Mmp13P33435 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp13P33435 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.92■□□□□ 0.62
Mmp13P33435 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Mmp13P33435 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp13P33435 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp13P33435 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp13P33435 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.92■□□□□ 0.62
Mmp13P33435 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
Mmp13P33435 Gm42778-201ENSMUST00000199644 553 ntBASIC18.92■□□□□ 0.62
Mmp13P33435 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp13P33435 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Mmp13P33435 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.92■□□□□ 0.62
Mmp13P33435 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp13P33435 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Mmp13P33435 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.91■□□□□ 0.62
Mmp13P33435 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.91■□□□□ 0.62
Mmp13P33435 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp13P33435 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp13P33435 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp13P33435 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp13P33435 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp13P33435 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp13P33435 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp13P33435 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp13P33435 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp13P33435 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp13P33435 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp13P33435 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp13P33435 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp13P33435 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp13P33435 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Mmp13P33435 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.9■□□□□ 0.62
Mmp13P33435 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp13P33435 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.9■□□□□ 0.62
Mmp13P33435 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp13P33435 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp13P33435 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp13P33435 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp13P33435 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp13P33435 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp13P33435 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp13P33435 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp13P33435 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp13P33435 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp13P33435 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp13P33435 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp13P33435 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp13P33435 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Mmp13P33435 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Mmp13P33435 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.89■□□□□ 0.62
Mmp13P33435 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp13P33435 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Mmp13P33435 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp13P33435 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.89■□□□□ 0.61
Mmp13P33435 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp13P33435 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.89■□□□□ 0.61
Mmp13P33435 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Mmp13P33435 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.89■□□□□ 0.61
Mmp13P33435 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.89■□□□□ 0.61
Mmp13P33435 Gm42642-201ENSMUST00000200683 355 ntBASIC18.89■□□□□ 0.61
Mmp13P33435 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp13P33435 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.89■□□□□ 0.61
Mmp13P33435 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Mmp13P33435 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.89■□□□□ 0.61
Mmp13P33435 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Mmp13P33435 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp13P33435 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp13P33435 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Mmp13P33435 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp13P33435 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp13P33435 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.88■□□□□ 0.61
Mmp13P33435 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp13P33435 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp13P33435 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp13P33435 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.88■□□□□ 0.61
Mmp13P33435 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp13P33435 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.88■□□□□ 0.61
Mmp13P33435 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp13P33435 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp13P33435 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.87■□□□□ 0.61
Mmp13P33435 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms