Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a1P31648 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a1P31648 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
Slc6a1P31648 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a1P31648 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a1P31648 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a1P31648 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a1P31648 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Slc6a1P31648 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Slc6a1P31648 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a1P31648 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.92■□□□□ 0.14
Slc6a1P31648 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a1P31648 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Slc6a1P31648 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a1P31648 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a1P31648 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a1P31648 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a1P31648 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a1P31648 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a1P31648 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Slc6a1P31648 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.92■□□□□ 0.14
Slc6a1P31648 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.92■□□□□ 0.14
Slc6a1P31648 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Slc6a1P31648 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a1P31648 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.92■□□□□ 0.14
Slc6a1P31648 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a1P31648 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a1P31648 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a1P31648 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a1P31648 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a1P31648 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a1P31648 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a1P31648 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.91■□□□□ 0.14
Slc6a1P31648 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a1P31648 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.91■□□□□ 0.14
Slc6a1P31648 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a1P31648 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Slc6a1P31648 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a1P31648 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a1P31648 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a1P31648 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.91■□□□□ 0.14
Slc6a1P31648 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a1P31648 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a1P31648 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a1P31648 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Slc6a1P31648 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a1P31648 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a1P31648 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.9■□□□□ 0.14
Slc6a1P31648 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a1P31648 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a1P31648 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Slc6a1P31648 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a1P31648 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a1P31648 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a1P31648 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a1P31648 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a1P31648 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.89■□□□□ 0.13
Slc6a1P31648 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a1P31648 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a1P31648 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a1P31648 Gm21956-201ENSMUST00000179946 522 ntBASIC15.89■□□□□ 0.13
Slc6a1P31648 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a1P31648 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.89■□□□□ 0.13
Slc6a1P31648 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Slc6a1P31648 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.89■□□□□ 0.13
Slc6a1P31648 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a1P31648 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a1P31648 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a1P31648 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a1P31648 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a1P31648 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a1P31648 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a1P31648 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a1P31648 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a1P31648 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a1P31648 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a1P31648 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a1P31648 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a1P31648 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a1P31648 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a1P31648 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.88■□□□□ 0.13
Slc6a1P31648 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a1P31648 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a1P31648 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Slc6a1P31648 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a1P31648 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a1P31648 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a1P31648 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Slc6a1P31648 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a1P31648 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a1P31648 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a1P31648 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
Slc6a1P31648 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a1P31648 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.87■□□□□ 0.13
Slc6a1P31648 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a1P31648 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a1P31648 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.87■□□□□ 0.13
Slc6a1P31648 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.87■□□□□ 0.13
Slc6a1P31648 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a1P31648 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms