Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SnrpbP27048 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SnrpbP27048 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SnrpbP27048 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SnrpbP27048 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SnrpbP27048 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SnrpbP27048 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SnrpbP27048 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SnrpbP27048 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SnrpbP27048 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.24■□□□□ 0.19
SnrpbP27048 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SnrpbP27048 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
SnrpbP27048 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SnrpbP27048 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SnrpbP27048 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SnrpbP27048 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.24■□□□□ 0.19
SnrpbP27048 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.24■□□□□ 0.19
SnrpbP27048 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SnrpbP27048 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SnrpbP27048 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SnrpbP27048 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SnrpbP27048 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SnrpbP27048 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SnrpbP27048 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SnrpbP27048 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SnrpbP27048 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SnrpbP27048 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SnrpbP27048 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SnrpbP27048 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SnrpbP27048 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SnrpbP27048 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SnrpbP27048 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SnrpbP27048 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SnrpbP27048 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.23■□□□□ 0.19
SnrpbP27048 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SnrpbP27048 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SnrpbP27048 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SnrpbP27048 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SnrpbP27048 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SnrpbP27048 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SnrpbP27048 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SnrpbP27048 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SnrpbP27048 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SnrpbP27048 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SnrpbP27048 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
SnrpbP27048 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SnrpbP27048 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.22■□□□□ 0.19
SnrpbP27048 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SnrpbP27048 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.22■□□□□ 0.19
SnrpbP27048 Gm15820-201ENSMUST00000201566 728 ntBASIC16.22■□□□□ 0.19
SnrpbP27048 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
SnrpbP27048 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SnrpbP27048 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SnrpbP27048 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SnrpbP27048 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SnrpbP27048 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SnrpbP27048 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SnrpbP27048 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SnrpbP27048 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SnrpbP27048 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SnrpbP27048 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SnrpbP27048 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SnrpbP27048 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SnrpbP27048 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SnrpbP27048 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SnrpbP27048 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SnrpbP27048 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SnrpbP27048 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.21■□□□□ 0.19
SnrpbP27048 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SnrpbP27048 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SnrpbP27048 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SnrpbP27048 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SnrpbP27048 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SnrpbP27048 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SnrpbP27048 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SnrpbP27048 Fst-202ENSMUST00000223640 2612 ntBASIC16.21■□□□□ 0.19
SnrpbP27048 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SnrpbP27048 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SnrpbP27048 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SnrpbP27048 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
SnrpbP27048 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SnrpbP27048 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SnrpbP27048 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SnrpbP27048 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SnrpbP27048 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
SnrpbP27048 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SnrpbP27048 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SnrpbP27048 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.2■□□□□ 0.18
SnrpbP27048 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SnrpbP27048 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SnrpbP27048 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SnrpbP27048 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SnrpbP27048 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SnrpbP27048 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.2■□□□□ 0.18
SnrpbP27048 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SnrpbP27048 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SnrpbP27048 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SnrpbP27048 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SnrpbP27048 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SnrpbP27048 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms