Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Pde6bP23440 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pde6bP23440 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Pde6bP23440 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.11■□□□□ 0.81
Pde6bP23440 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.11■□□□□ 0.81
Pde6bP23440 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pde6bP23440 Mir7071-201ENSMUST00000184847 69 ntBASIC20.11■□□□□ 0.81
Pde6bP23440 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.11■□□□□ 0.81
Pde6bP23440 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pde6bP23440 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pde6bP23440 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pde6bP23440 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Pde6bP23440 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pde6bP23440 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pde6bP23440 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pde6bP23440 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pde6bP23440 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pde6bP23440 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.1■□□□□ 0.81
Pde6bP23440 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pde6bP23440 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pde6bP23440 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pde6bP23440 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.1■□□□□ 0.81
Pde6bP23440 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pde6bP23440 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pde6bP23440 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pde6bP23440 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pde6bP23440 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pde6bP23440 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pde6bP23440 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Pde6bP23440 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pde6bP23440 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pde6bP23440 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pde6bP23440 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pde6bP23440 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pde6bP23440 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Pde6bP23440 Mir6982-201ENSMUST00000184354 68 ntBASIC20.09■□□□□ 0.81
Pde6bP23440 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Pde6bP23440 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pde6bP23440 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pde6bP23440 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pde6bP23440 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.09■□□□□ 0.81
Pde6bP23440 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pde6bP23440 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pde6bP23440 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pde6bP23440 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pde6bP23440 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pde6bP23440 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pde6bP23440 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Pde6bP23440 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pde6bP23440 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6bP23440 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6bP23440 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6bP23440 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6bP23440 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6bP23440 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Pde6bP23440 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pde6bP23440 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6bP23440 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pde6bP23440 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
Pde6bP23440 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6bP23440 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6bP23440 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6bP23440 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6bP23440 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6bP23440 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pde6bP23440 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6bP23440 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pde6bP23440 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.06■□□□□ 0.8
Pde6bP23440 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6bP23440 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6bP23440 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6bP23440 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pde6bP23440 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pde6bP23440 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.06■□□□□ 0.8
Pde6bP23440 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6bP23440 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6bP23440 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6bP23440 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6bP23440 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6bP23440 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6bP23440 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6bP23440 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.05■□□□□ 0.8
Pde6bP23440 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.05■□□□□ 0.8
Pde6bP23440 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6bP23440 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6bP23440 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.05■□□□□ 0.8
Pde6bP23440 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6bP23440 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6bP23440 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6bP23440 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.05■□□□□ 0.8
Pde6bP23440 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.05■□□□□ 0.8
Pde6bP23440 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.05■□□□□ 0.8
Pde6bP23440 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6bP23440 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6bP23440 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.05■□□□□ 0.8
Pde6bP23440 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pde6bP23440 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6bP23440 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.04■□□□□ 0.8
Pde6bP23440 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6bP23440 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms