Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BdnfP21237 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BdnfP21237 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BdnfP21237 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BdnfP21237 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BdnfP21237 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.69■□□□□ 0.42
BdnfP21237 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BdnfP21237 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BdnfP21237 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
BdnfP21237 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BdnfP21237 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BdnfP21237 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
BdnfP21237 Gm40848-201ENSMUST00000221998 324 ntBASIC17.68■□□□□ 0.42
BdnfP21237 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BdnfP21237 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BdnfP21237 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
BdnfP21237 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.68■□□□□ 0.42
BdnfP21237 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.68■□□□□ 0.42
BdnfP21237 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BdnfP21237 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BdnfP21237 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BdnfP21237 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BdnfP21237 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BdnfP21237 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BdnfP21237 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BdnfP21237 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BdnfP21237 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
BdnfP21237 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BdnfP21237 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BdnfP21237 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BdnfP21237 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BdnfP21237 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
BdnfP21237 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BdnfP21237 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BdnfP21237 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BdnfP21237 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BdnfP21237 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BdnfP21237 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BdnfP21237 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BdnfP21237 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
BdnfP21237 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BdnfP21237 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BdnfP21237 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BdnfP21237 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BdnfP21237 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BdnfP21237 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BdnfP21237 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BdnfP21237 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.66■□□□□ 0.42
BdnfP21237 Gm43017-201ENSMUST00000198296 752 ntBASIC17.66■□□□□ 0.42
BdnfP21237 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BdnfP21237 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BdnfP21237 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BdnfP21237 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BdnfP21237 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BdnfP21237 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
BdnfP21237 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
BdnfP21237 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BdnfP21237 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BdnfP21237 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
BdnfP21237 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
BdnfP21237 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BdnfP21237 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BdnfP21237 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BdnfP21237 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
BdnfP21237 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.65■□□□□ 0.42
BdnfP21237 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BdnfP21237 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BdnfP21237 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
BdnfP21237 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
BdnfP21237 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
BdnfP21237 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
BdnfP21237 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BdnfP21237 Gm7860-201ENSMUST00000121190 879 ntBASIC17.64■□□□□ 0.41
BdnfP21237 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
BdnfP21237 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BdnfP21237 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BdnfP21237 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BdnfP21237 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BdnfP21237 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BdnfP21237 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BdnfP21237 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BdnfP21237 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BdnfP21237 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BdnfP21237 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BdnfP21237 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.63■□□□□ 0.41
BdnfP21237 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.63■□□□□ 0.41
BdnfP21237 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.63■□□□□ 0.41
BdnfP21237 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BdnfP21237 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BdnfP21237 Gm26833-201ENSMUST00000180899 440 ntBASIC17.63■□□□□ 0.41
BdnfP21237 Gm27801-201ENSMUST00000184174 223 ntBASIC17.63■□□□□ 0.41
BdnfP21237 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.63■□□□□ 0.41
BdnfP21237 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.63■□□□□ 0.41
BdnfP21237 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
BdnfP21237 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BdnfP21237 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
BdnfP21237 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BdnfP21237 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
BdnfP21237 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BdnfP21237 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms