Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cd44P15379 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cd44P15379 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd44P15379 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd44P15379 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd44P15379 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cd44P15379 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd44P15379 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.49■□□□□ 0.71
Cd44P15379 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd44P15379 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.49■□□□□ 0.71
Cd44P15379 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cd44P15379 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd44P15379 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.48■□□□□ 0.71
Cd44P15379 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cd44P15379 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cd44P15379 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd44P15379 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd44P15379 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd44P15379 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd44P15379 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd44P15379 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd44P15379 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.48■□□□□ 0.71
Cd44P15379 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Cd44P15379 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd44P15379 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd44P15379 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd44P15379 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd44P15379 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd44P15379 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd44P15379 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Cd44P15379 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd44P15379 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.47■□□□□ 0.71
Cd44P15379 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd44P15379 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd44P15379 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd44P15379 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd44P15379 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.46■□□□□ 0.71
Cd44P15379 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd44P15379 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd44P15379 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cd44P15379 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cd44P15379 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd44P15379 Gm45417-201ENSMUST00000209533 758 ntBASIC19.46■□□□□ 0.71
Cd44P15379 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.46■□□□□ 0.71
Cd44P15379 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cd44P15379 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Cd44P15379 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cd44P15379 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd44P15379 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.46■□□□□ 0.71
Cd44P15379 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.7
Cd44P15379 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
Cd44P15379 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cd44P15379 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd44P15379 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd44P15379 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cd44P15379 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd44P15379 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.45■□□□□ 0.7
Cd44P15379 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd44P15379 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd44P15379 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd44P15379 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd44P15379 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd44P15379 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd44P15379 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.45■□□□□ 0.7
Cd44P15379 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd44P15379 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd44P15379 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd44P15379 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd44P15379 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
Cd44P15379 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cd44P15379 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd44P15379 Gm26833-201ENSMUST00000180899 440 ntBASIC19.44■□□□□ 0.7
Cd44P15379 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.44■□□□□ 0.7
Cd44P15379 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd44P15379 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.44■□□□□ 0.7
Cd44P15379 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd44P15379 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd44P15379 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd44P15379 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd44P15379 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd44P15379 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd44P15379 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd44P15379 Gm12821-201ENSMUST00000120022 600 ntBASIC19.43■□□□□ 0.7
Cd44P15379 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.43■□□□□ 0.7
Cd44P15379 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cd44P15379 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd44P15379 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.43■□□□□ 0.7
Cd44P15379 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.43■□□□□ 0.7
Cd44P15379 Gm43017-201ENSMUST00000198296 752 ntBASIC19.43■□□□□ 0.7
Cd44P15379 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd44P15379 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cd44P15379 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cd44P15379 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Cd44P15379 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Cd44P15379 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd44P15379 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd44P15379 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cd44P15379 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd44P15379 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd44P15379 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms