Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Srp54P14576 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srp54P14576 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Srp54P14576 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srp54P14576 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Srp54P14576 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Srp54P14576 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Srp54P14576 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srp54P14576 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.17■□□□□ 0.5
Srp54P14576 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srp54P14576 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.17■□□□□ 0.5
Srp54P14576 Gm8520-201ENSMUST00000186517 868 ntBASIC18.17■□□□□ 0.5
Srp54P14576 Gm37856-201ENSMUST00000191634 999 ntBASIC18.17■□□□□ 0.5
Srp54P14576 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.17■□□□□ 0.5
Srp54P14576 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.17■□□□□ 0.5
Srp54P14576 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srp54P14576 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srp54P14576 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.17■□□□□ 0.5
Srp54P14576 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srp54P14576 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srp54P14576 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srp54P14576 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srp54P14576 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srp54P14576 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Srp54P14576 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Srp54P14576 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srp54P14576 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srp54P14576 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.16■□□□□ 0.5
Srp54P14576 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srp54P14576 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Srp54P14576 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Srp54P14576 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.16■□□□□ 0.5
Srp54P14576 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.16■□□□□ 0.5
Srp54P14576 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srp54P14576 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Srp54P14576 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srp54P14576 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Srp54P14576 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srp54P14576 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srp54P14576 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srp54P14576 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Srp54P14576 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srp54P14576 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srp54P14576 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Srp54P14576 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srp54P14576 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srp54P14576 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Srp54P14576 Gm22240-201ENSMUST00000175225 82 ntBASIC18.15■□□□□ 0.5
Srp54P14576 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srp54P14576 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Srp54P14576 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srp54P14576 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srp54P14576 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.15■□□□□ 0.5
Srp54P14576 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Srp54P14576 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srp54P14576 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Srp54P14576 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srp54P14576 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Srp54P14576 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Srp54P14576 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srp54P14576 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srp54P14576 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Srp54P14576 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Srp54P14576 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srp54P14576 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Srp54P14576 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srp54P14576 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Srp54P14576 Trmt13-210ENSMUST00000198454 880 ntBASIC18.14■□□□□ 0.49
Srp54P14576 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.14■□□□□ 0.49
Srp54P14576 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Srp54P14576 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srp54P14576 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srp54P14576 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srp54P14576 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Srp54P14576 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srp54P14576 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp54P14576 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Srp54P14576 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.13■□□□□ 0.49
Srp54P14576 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp54P14576 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Srp54P14576 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.13■□□□□ 0.49
Srp54P14576 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Srp54P14576 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp54P14576 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Srp54P14576 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp54P14576 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp54P14576 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp54P14576 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp54P14576 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srp54P14576 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.12■□□□□ 0.49
Srp54P14576 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srp54P14576 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srp54P14576 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Srp54P14576 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Srp54P14576 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Srp54P14576 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Srp54P14576 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.12■□□□□ 0.49
Srp54P14576 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.12■□□□□ 0.49
Srp54P14576 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Srp54P14576 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms