Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Polr2aP08775 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.38■■□□□ 1.01
Polr2aP08775 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Polr2aP08775 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.38■■□□□ 1.01
Polr2aP08775 Ank2-226ENSMUST00000189368 339 ntBASIC21.37■■□□□ 1.01
Polr2aP08775 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.37■■□□□ 1.01
Polr2aP08775 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.37■■□□□ 1.01
Polr2aP08775 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Polr2aP08775 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Polr2aP08775 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Polr2aP08775 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Polr2aP08775 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Polr2aP08775 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Polr2aP08775 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Polr2aP08775 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Polr2aP08775 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Polr2aP08775 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Polr2aP08775 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.36■■□□□ 1.01
Polr2aP08775 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Polr2aP08775 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Polr2aP08775 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Polr2aP08775 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Polr2aP08775 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Polr2aP08775 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Polr2aP08775 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.35■■□□□ 1.01
Polr2aP08775 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.35■■□□□ 1.01
Polr2aP08775 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Polr2aP08775 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Polr2aP08775 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.34■■□□□ 1.01
Polr2aP08775 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.34■■□□□ 1.01
Polr2aP08775 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Polr2aP08775 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
Polr2aP08775 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Polr2aP08775 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Polr2aP08775 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
Polr2aP08775 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC21.34■■□□□ 1.01
Polr2aP08775 Gm33142-201ENSMUST00000193913 867 ntBASIC21.34■■□□□ 1.01
Polr2aP08775 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Polr2aP08775 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Polr2aP08775 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Polr2aP08775 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Polr2aP08775 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Polr2aP08775 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Polr2aP08775 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC21.33■■□□□ 1
Polr2aP08775 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Polr2aP08775 Gm14464-201ENSMUST00000119658 1254 ntBASIC21.32■■□□□ 1
Polr2aP08775 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Polr2aP08775 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Polr2aP08775 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Polr2aP08775 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Polr2aP08775 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.32■■□□□ 1
Polr2aP08775 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Polr2aP08775 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.32■■□□□ 1
Polr2aP08775 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.32■■□□□ 1
Polr2aP08775 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC21.32■■□□□ 1
Polr2aP08775 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Polr2aP08775 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Polr2aP08775 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.31■■□□□ 1
Polr2aP08775 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Polr2aP08775 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC21.31■■□□□ 1
Polr2aP08775 Mir6349-201ENSMUST00000184059 97 ntBASIC21.31■■□□□ 1
Polr2aP08775 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Polr2aP08775 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Polr2aP08775 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Polr2aP08775 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC21.31■■□□□ 1
Polr2aP08775 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Polr2aP08775 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.3■■□□□ 1
Polr2aP08775 AA414768-201ENSMUST00000121924 1257 ntBASIC21.3■■□□□ 1
Polr2aP08775 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Polr2aP08775 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Polr2aP08775 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Polr2aP08775 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Polr2aP08775 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.3■■□□□ 1
Polr2aP08775 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Polr2aP08775 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Polr2aP08775 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Polr2aP08775 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Polr2aP08775 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Polr2aP08775 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Polr2aP08775 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Polr2aP08775 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.29■■□□□ 1
Polr2aP08775 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Polr2aP08775 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Polr2aP08775 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Polr2aP08775 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Polr2aP08775 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Polr2aP08775 Gm12085-201ENSMUST00000119263 940 ntBASIC21.28■■□□□ 1
Polr2aP08775 Gm38285-201ENSMUST00000192928 922 ntBASIC21.28■■□□□ 1
Polr2aP08775 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.28■■□□□ 1
Polr2aP08775 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Polr2aP08775 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.28■■□□□ 1
Polr2aP08775 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Polr2aP08775 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Polr2aP08775 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.28■■□□□ 1
Polr2aP08775 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC21.28■■□□□ 1
Polr2aP08775 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.28■■□□□ 1
Polr2aP08775 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC21.28■■□□□ 1
Polr2aP08775 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.27■■□□□ 1
Polr2aP08775 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Polr2aP08775 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms