Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gm10138-203ENSMUST00000206952 366 ntBASIC17.54■□□□□ 0.4
Sod1P08228 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sod1P08228 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sod1P08228 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sod1P08228 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sod1P08228 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.54■□□□□ 0.4
Sod1P08228 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sod1P08228 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sod1P08228 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sod1P08228 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sod1P08228 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sod1P08228 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sod1P08228 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.53■□□□□ 0.4
Sod1P08228 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Sod1P08228 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sod1P08228 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sod1P08228 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.53■□□□□ 0.4
Sod1P08228 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sod1P08228 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sod1P08228 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.53■□□□□ 0.4
Sod1P08228 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sod1P08228 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sod1P08228 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Sod1P08228 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sod1P08228 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Sod1P08228 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sod1P08228 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sod1P08228 Gm11643-201ENSMUST00000119578 864 ntBASIC17.52■□□□□ 0.4
Sod1P08228 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.52■□□□□ 0.4
Sod1P08228 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.52■□□□□ 0.4
Sod1P08228 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sod1P08228 Gm38285-201ENSMUST00000192928 922 ntBASIC17.52■□□□□ 0.4
Sod1P08228 Gm43183-201ENSMUST00000200632 547 ntBASIC17.52■□□□□ 0.4
Sod1P08228 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sod1P08228 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sod1P08228 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.52■□□□□ 0.39
Sod1P08228 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sod1P08228 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Sod1P08228 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sod1P08228 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sod1P08228 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sod1P08228 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sod1P08228 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sod1P08228 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sod1P08228 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sod1P08228 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sod1P08228 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sod1P08228 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sod1P08228 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sod1P08228 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sod1P08228 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sod1P08228 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sod1P08228 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sod1P08228 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sod1P08228 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Sod1P08228 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sod1P08228 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sod1P08228 Gm15375-201ENSMUST00000119510 849 ntBASIC17.5■□□□□ 0.39
Sod1P08228 Gm18025-201ENSMUST00000221733 862 ntBASIC17.5■□□□□ 0.39
Sod1P08228 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sod1P08228 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sod1P08228 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sod1P08228 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sod1P08228 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sod1P08228 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sod1P08228 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sod1P08228 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sod1P08228 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.49■□□□□ 0.39
Sod1P08228 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sod1P08228 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sod1P08228 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sod1P08228 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sod1P08228 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.49■□□□□ 0.39
Sod1P08228 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sod1P08228 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sod1P08228 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.49■□□□□ 0.39
Sod1P08228 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sod1P08228 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sod1P08228 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sod1P08228 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sod1P08228 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sod1P08228 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sod1P08228 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Sod1P08228 Gm21814-202ENSMUST00000203277 873 ntBASIC17.48■□□□□ 0.39
Sod1P08228 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.48■□□□□ 0.39
Sod1P08228 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sod1P08228 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sod1P08228 Gm9987-201ENSMUST00000069768 567 ntBASIC17.48■□□□□ 0.39
Sod1P08228 Gm5417-201ENSMUST00000079706 384 ntBASIC17.48■□□□□ 0.39
Sod1P08228 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sod1P08228 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sod1P08228 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sod1P08228 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Sod1P08228 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sod1P08228 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.47■□□□□ 0.39
Sod1P08228 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.47■□□□□ 0.39
Sod1P08228 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.47■□□□□ 0.39
Sod1P08228 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sod1P08228 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sod1P08228 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms