Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TnfP06804 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TnfP06804 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TnfP06804 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TnfP06804 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TnfP06804 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TnfP06804 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TnfP06804 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TnfP06804 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TnfP06804 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TnfP06804 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TnfP06804 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TnfP06804 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TnfP06804 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.69■□□□□ 0.74
TnfP06804 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TnfP06804 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.69■□□□□ 0.74
TnfP06804 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.69■□□□□ 0.74
TnfP06804 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.69■□□□□ 0.74
TnfP06804 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TnfP06804 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TnfP06804 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TnfP06804 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.69■□□□□ 0.74
TnfP06804 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TnfP06804 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TnfP06804 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TnfP06804 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TnfP06804 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TnfP06804 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TnfP06804 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TnfP06804 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TnfP06804 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TnfP06804 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TnfP06804 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TnfP06804 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TnfP06804 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TnfP06804 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TnfP06804 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TnfP06804 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.68■□□□□ 0.74
TnfP06804 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TnfP06804 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
TnfP06804 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TnfP06804 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TnfP06804 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.67■□□□□ 0.74
TnfP06804 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TnfP06804 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TnfP06804 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TnfP06804 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TnfP06804 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TnfP06804 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TnfP06804 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TnfP06804 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TnfP06804 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TnfP06804 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TnfP06804 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.66■□□□□ 0.74
TnfP06804 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.66■□□□□ 0.74
TnfP06804 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TnfP06804 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TnfP06804 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TnfP06804 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TnfP06804 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TnfP06804 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TnfP06804 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TnfP06804 Gm2399-201ENSMUST00000104944 225 ntBASIC19.65■□□□□ 0.74
TnfP06804 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TnfP06804 Gm11249-201ENSMUST00000117071 859 ntBASIC19.65■□□□□ 0.74
TnfP06804 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TnfP06804 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TnfP06804 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TnfP06804 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TnfP06804 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TnfP06804 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TnfP06804 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TnfP06804 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TnfP06804 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TnfP06804 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TnfP06804 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TnfP06804 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TnfP06804 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TnfP06804 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.64■□□□□ 0.73
TnfP06804 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TnfP06804 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TnfP06804 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TnfP06804 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TnfP06804 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TnfP06804 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TnfP06804 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.63■□□□□ 0.73
TnfP06804 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.63■□□□□ 0.73
TnfP06804 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.63■□□□□ 0.73
TnfP06804 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TnfP06804 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TnfP06804 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TnfP06804 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TnfP06804 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TnfP06804 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TnfP06804 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TnfP06804 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.62■□□□□ 0.73
TnfP06804 Gm5643-201ENSMUST00000117081 966 ntBASIC19.62■□□□□ 0.73
TnfP06804 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TnfP06804 Gm22325-201ENSMUST00000158904 308 ntBASIC19.62■□□□□ 0.73
TnfP06804 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms