Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
P06328 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
P06328 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
P06328 Gm27454-201ENSMUST00000185090 204 ntBASIC13.56□□□□□ -0.24
P06328 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
P06328 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
P06328 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.56□□□□□ -0.24
P06328 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
P06328 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06328 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.55□□□□□ -0.24
P06328 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06328 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06328 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
P06328 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06328 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06328 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
P06328 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.55□□□□□ -0.24
P06328 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.55□□□□□ -0.24
P06328 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.55□□□□□ -0.24
P06328 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.55□□□□□ -0.24
P06328 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06328 Gm40848-201ENSMUST00000221998 324 ntBASIC13.55□□□□□ -0.24
P06328 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06328 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.55□□□□□ -0.24
P06328 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06328 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
P06328 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06328 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06328 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06328 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06328 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06328 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06328 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06328 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06328 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06328 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06328 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P06328 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P06328 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06328 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
P06328 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06328 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.54□□□□□ -0.24
P06328 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06328 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06328 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
P06328 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06328 Gm26833-201ENSMUST00000180899 440 ntBASIC13.54□□□□□ -0.24
P06328 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06328 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P06328 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06328 Gm6139-201ENSMUST00000079261 882 ntBASIC13.54□□□□□ -0.24
P06328 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P06328 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P06328 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
P06328 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.54□□□□□ -0.24
P06328 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P06328 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.54□□□□□ -0.24
P06328 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
P06328 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
P06328 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.53□□□□□ -0.24
P06328 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.53□□□□□ -0.24
P06328 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06328 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.53□□□□□ -0.24
P06328 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.53□□□□□ -0.24
P06328 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms