Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
P04946 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
P04946 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
P04946 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
P04946 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
P04946 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
P04946 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
P04946 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
P04946 Gm2399-201ENSMUST00000104944 225 ntBASIC15.93■□□□□ 0.14
P04946 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
P04946 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.93■□□□□ 0.14
P04946 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.93■□□□□ 0.14
P04946 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
P04946 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
P04946 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
P04946 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
P04946 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
P04946 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
P04946 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
P04946 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
P04946 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
P04946 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.92■□□□□ 0.14
P04946 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
P04946 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
P04946 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.92■□□□□ 0.14
P04946 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
P04946 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04946 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04946 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04946 Gm11249-201ENSMUST00000117071 859 ntBASIC15.91■□□□□ 0.14
P04946 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.91■□□□□ 0.14
P04946 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.91■□□□□ 0.14
P04946 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
P04946 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04946 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04946 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04946 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04946 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04946 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
P04946 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
P04946 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04946 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
P04946 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
P04946 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
P04946 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
P04946 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
P04946 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
P04946 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
P04946 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
P04946 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.9■□□□□ 0.14
P04946 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
P04946 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
P04946 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
P04946 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
P04946 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
P04946 Flg-201ENSMUST00000050758 1488 ntBASIC15.9■□□□□ 0.14
P04946 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
P04946 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
P04946 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04946 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04946 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04946 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
P04946 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
P04946 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.89■□□□□ 0.13
P04946 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.89■□□□□ 0.13
P04946 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.89■□□□□ 0.13
P04946 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04946 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
P04946 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04946 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04946 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04946 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04946 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04946 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04946 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P04946 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
P04946 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
P04946 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
P04946 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
P04946 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
P04946 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
P04946 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.88■□□□□ 0.13
P04946 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
P04946 Gm5643-201ENSMUST00000117081 966 ntBASIC15.88■□□□□ 0.13
P04946 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
P04946 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
P04946 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
P04946 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
P04946 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
P04946 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.88■□□□□ 0.13
P04946 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
P04946 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.87■□□□□ 0.13
P04946 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
P04946 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
P04946 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
P04946 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
P04946 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
P04946 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
P04946 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.87■□□□□ 0.13
P04946 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms