Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfb1P04202 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfb1P04202 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfb1P04202 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Tgfb1P04202 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfb1P04202 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.15■□□□□ 0.34
Tgfb1P04202 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Tgfb1P04202 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfb1P04202 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfb1P04202 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfb1P04202 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfb1P04202 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfb1P04202 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfb1P04202 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfb1P04202 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Tgfb1P04202 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tgfb1P04202 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tgfb1P04202 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.14■□□□□ 0.33
Tgfb1P04202 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tgfb1P04202 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Tgfb1P04202 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.14■□□□□ 0.33
Tgfb1P04202 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.14■□□□□ 0.33
Tgfb1P04202 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.14■□□□□ 0.33
Tgfb1P04202 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tgfb1P04202 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.14■□□□□ 0.33
Tgfb1P04202 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.14■□□□□ 0.33
Tgfb1P04202 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tgfb1P04202 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfb1P04202 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfb1P04202 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfb1P04202 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.13■□□□□ 0.33
Tgfb1P04202 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfb1P04202 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfb1P04202 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.13■□□□□ 0.33
Tgfb1P04202 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Tgfb1P04202 Gm10493-201ENSMUST00000097270 612 ntBASIC17.13■□□□□ 0.33
Tgfb1P04202 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfb1P04202 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tgfb1P04202 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
Tgfb1P04202 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfb1P04202 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfb1P04202 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfb1P04202 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfb1P04202 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tgfb1P04202 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tgfb1P04202 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tgfb1P04202 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tgfb1P04202 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tgfb1P04202 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.12■□□□□ 0.33
Tgfb1P04202 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Tgfb1P04202 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.12■□□□□ 0.33
Tgfb1P04202 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.12■□□□□ 0.33
Tgfb1P04202 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.12■□□□□ 0.33
Tgfb1P04202 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Tgfb1P04202 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tgfb1P04202 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Tgfb1P04202 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tgfb1P04202 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tgfb1P04202 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.12■□□□□ 0.33
Tgfb1P04202 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tgfb1P04202 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tgfb1P04202 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.11■□□□□ 0.33
Tgfb1P04202 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tgfb1P04202 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tgfb1P04202 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tgfb1P04202 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tgfb1P04202 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tgfb1P04202 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tgfb1P04202 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tgfb1P04202 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Tgfb1P04202 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tgfb1P04202 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tgfb1P04202 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tgfb1P04202 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tgfb1P04202 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.1■□□□□ 0.33
Tgfb1P04202 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.1■□□□□ 0.33
Tgfb1P04202 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tgfb1P04202 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Tgfb1P04202 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.1■□□□□ 0.33
Tgfb1P04202 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.1■□□□□ 0.33
Tgfb1P04202 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.1■□□□□ 0.33
Tgfb1P04202 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tgfb1P04202 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Tgfb1P04202 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tgfb1P04202 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tgfb1P04202 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tgfb1P04202 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Tgfb1P04202 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Tgfb1P04202 Grk6-206ENSMUST00000224995 2971 ntBASIC17.1■□□□□ 0.33
Tgfb1P04202 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tgfb1P04202 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tgfb1P04202 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tgfb1P04202 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tgfb1P04202 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tgfb1P04202 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tgfb1P04202 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.09■□□□□ 0.33
Tgfb1P04202 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tgfb1P04202 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tgfb1P04202 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tgfb1P04202 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms