Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
P01734 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
P01734 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01734 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01734 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
P01734 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
P01734 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01734 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01734 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01734 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
P01734 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01734 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
P01734 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.17■□□□□ 0.82
P01734 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.17■□□□□ 0.82
P01734 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01734 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
P01734 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
P01734 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01734 Iqck-206ENSMUST00000208658 2891 ntBASIC20.17■□□□□ 0.82
P01734 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
P01734 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
P01734 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
P01734 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01734 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
P01734 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
P01734 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.16■□□□□ 0.82
P01734 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.16■□□□□ 0.82
P01734 Rab3c-203ENSMUST00000224180 967 ntBASIC20.16■□□□□ 0.82
P01734 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.16■□□□□ 0.82
P01734 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01734 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01734 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
P01734 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01734 BC021767-201ENSMUST00000126387 1716 ntBASIC20.16■□□□□ 0.82
P01734 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01734 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01734 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01734 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01734 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.15■□□□□ 0.82
P01734 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01734 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01734 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01734 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01734 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01734 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.15■□□□□ 0.82
P01734 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01734 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.15■□□□□ 0.82
P01734 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
P01734 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01734 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
P01734 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.14■□□□□ 0.82
P01734 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.14■□□□□ 0.82
P01734 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01734 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01734 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01734 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01734 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.14■□□□□ 0.81
P01734 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.14■□□□□ 0.81
P01734 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01734 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01734 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
P01734 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01734 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01734 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01734 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01734 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
P01734 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
P01734 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
P01734 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01734 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
P01734 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01734 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.13■□□□□ 0.81
P01734 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
P01734 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01734 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01734 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01734 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01734 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
P01734 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01734 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01734 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01734 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.12■□□□□ 0.81
P01734 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01734 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01734 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01734 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.12■□□□□ 0.81
P01734 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.12■□□□□ 0.81
P01734 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.12■□□□□ 0.81
P01734 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.12■□□□□ 0.81
P01734 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01734 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
P01734 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.12■□□□□ 0.81
P01734 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.12■□□□□ 0.81
P01734 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
P01734 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01734 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P01734 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.12■□□□□ 0.81
P01734 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01734 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
P01734 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms