Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sp1O89090 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Sp1O89090 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Sp1O89090 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sp1O89090 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sp1O89090 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sp1O89090 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sp1O89090 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sp1O89090 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sp1O89090 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Sp1O89090 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sp1O89090 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sp1O89090 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sp1O89090 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sp1O89090 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.77■□□□□ 0.6
Sp1O89090 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sp1O89090 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sp1O89090 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.77■□□□□ 0.6
Sp1O89090 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sp1O89090 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sp1O89090 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sp1O89090 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Sp1O89090 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.77■□□□□ 0.59
Sp1O89090 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sp1O89090 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sp1O89090 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sp1O89090 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.76■□□□□ 0.59
Sp1O89090 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sp1O89090 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sp1O89090 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.76■□□□□ 0.59
Sp1O89090 Gm8520-201ENSMUST00000186517 868 ntBASIC18.76■□□□□ 0.59
Sp1O89090 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.76■□□□□ 0.59
Sp1O89090 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.76■□□□□ 0.59
Sp1O89090 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sp1O89090 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sp1O89090 BC021767-201ENSMUST00000126387 1716 ntBASIC18.76■□□□□ 0.59
Sp1O89090 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sp1O89090 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sp1O89090 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sp1O89090 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Sp1O89090 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sp1O89090 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sp1O89090 Gm13168-201ENSMUST00000121771 632 ntBASIC18.75■□□□□ 0.59
Sp1O89090 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.75■□□□□ 0.59
Sp1O89090 Gm22240-201ENSMUST00000175225 82 ntBASIC18.75■□□□□ 0.59
Sp1O89090 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sp1O89090 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sp1O89090 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.75■□□□□ 0.59
Sp1O89090 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sp1O89090 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sp1O89090 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.74■□□□□ 0.59
Sp1O89090 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sp1O89090 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Gm22325-201ENSMUST00000158904 308 ntBASIC18.74■□□□□ 0.59
Sp1O89090 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sp1O89090 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sp1O89090 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sp1O89090 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Sp1O89090 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sp1O89090 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sp1O89090 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sp1O89090 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sp1O89090 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sp1O89090 Gm2399-201ENSMUST00000104944 225 ntBASIC18.73■□□□□ 0.59
Sp1O89090 Gm11249-201ENSMUST00000117071 859 ntBASIC18.73■□□□□ 0.59
Sp1O89090 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.73■□□□□ 0.59
Sp1O89090 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sp1O89090 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sp1O89090 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sp1O89090 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sp1O89090 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Sp1O89090 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.72■□□□□ 0.59
Sp1O89090 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sp1O89090 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sp1O89090 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sp1O89090 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sp1O89090 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.72■□□□□ 0.59
Sp1O89090 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.72■□□□□ 0.59
Sp1O89090 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sp1O89090 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sp1O89090 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sp1O89090 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sp1O89090 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sp1O89090 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms