Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CopeO89079 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CopeO89079 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.13■□□□□ 0.65
CopeO89079 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CopeO89079 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CopeO89079 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CopeO89079 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.13■□□□□ 0.65
CopeO89079 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CopeO89079 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CopeO89079 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CopeO89079 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CopeO89079 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CopeO89079 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CopeO89079 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CopeO89079 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CopeO89079 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CopeO89079 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CopeO89079 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CopeO89079 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CopeO89079 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.12■□□□□ 0.65
CopeO89079 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CopeO89079 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CopeO89079 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CopeO89079 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CopeO89079 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CopeO89079 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CopeO89079 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CopeO89079 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CopeO89079 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CopeO89079 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CopeO89079 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CopeO89079 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CopeO89079 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CopeO89079 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CopeO89079 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CopeO89079 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CopeO89079 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CopeO89079 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CopeO89079 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CopeO89079 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.11■□□□□ 0.65
CopeO89079 Gm11421-201ENSMUST00000122124 294 ntBASIC19.11■□□□□ 0.65
CopeO89079 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CopeO89079 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.11■□□□□ 0.65
CopeO89079 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CopeO89079 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.11■□□□□ 0.65
CopeO89079 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CopeO89079 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CopeO89079 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CopeO89079 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CopeO89079 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CopeO89079 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CopeO89079 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CopeO89079 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CopeO89079 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CopeO89079 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.1■□□□□ 0.65
CopeO89079 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.1■□□□□ 0.65
CopeO89079 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CopeO89079 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CopeO89079 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CopeO89079 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CopeO89079 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CopeO89079 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CopeO89079 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.1■□□□□ 0.65
CopeO89079 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CopeO89079 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CopeO89079 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CopeO89079 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CopeO89079 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CopeO89079 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CopeO89079 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.09■□□□□ 0.65
CopeO89079 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CopeO89079 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CopeO89079 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CopeO89079 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CopeO89079 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CopeO89079 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CopeO89079 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CopeO89079 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CopeO89079 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CopeO89079 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CopeO89079 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CopeO89079 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CopeO89079 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CopeO89079 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.08■□□□□ 0.65
CopeO89079 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CopeO89079 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CopeO89079 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CopeO89079 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CopeO89079 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CopeO89079 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CopeO89079 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CopeO89079 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CopeO89079 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.08■□□□□ 0.64
CopeO89079 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CopeO89079 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CopeO89079 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CopeO89079 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
CopeO89079 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CopeO89079 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CopeO89079 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms