Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc6a20bO88575 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc6a20bO88575 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc6a20bO88575 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Slc6a20bO88575 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a20bO88575 Gm42545-201ENSMUST00000202755 922 ntBASIC20.32■□□□□ 0.84
Slc6a20bO88575 Gm18025-201ENSMUST00000221733 862 ntBASIC20.32■□□□□ 0.84
Slc6a20bO88575 Odf3b-204ENSMUST00000227834 930 ntBASIC20.32■□□□□ 0.84
Slc6a20bO88575 Zfp783-201ENSMUST00000095946 670 ntBASIC20.32■□□□□ 0.84
Slc6a20bO88575 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a20bO88575 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a20bO88575 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a20bO88575 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.32■□□□□ 0.84
Slc6a20bO88575 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.32■□□□□ 0.84
Slc6a20bO88575 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a20bO88575 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a20bO88575 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.31■□□□□ 0.84
Slc6a20bO88575 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a20bO88575 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a20bO88575 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Slc6a20bO88575 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.31■□□□□ 0.84
Slc6a20bO88575 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a20bO88575 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a20bO88575 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a20bO88575 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Slc6a20bO88575 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Slc6a20bO88575 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a20bO88575 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a20bO88575 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a20bO88575 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.3■□□□□ 0.84
Slc6a20bO88575 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Slc6a20bO88575 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a20bO88575 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a20bO88575 Gm3375-201ENSMUST00000203929 796 ntBASIC20.3■□□□□ 0.84
Slc6a20bO88575 Gm10138-203ENSMUST00000206952 366 ntBASIC20.3■□□□□ 0.84
Slc6a20bO88575 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a20bO88575 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a20bO88575 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a20bO88575 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.29■□□□□ 0.84
Slc6a20bO88575 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.29■□□□□ 0.84
Slc6a20bO88575 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Gm10517-202ENSMUST00000192970 758 ntBASIC20.29■□□□□ 0.84
Slc6a20bO88575 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Slc6a20bO88575 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20bO88575 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
Slc6a20bO88575 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.28■□□□□ 0.84
Slc6a20bO88575 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a20bO88575 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Slc6a20bO88575 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a20bO88575 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a20bO88575 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.28■□□□□ 0.84
Slc6a20bO88575 Gm37292-201ENSMUST00000192062 758 ntBASIC20.28■□□□□ 0.84
Slc6a20bO88575 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a20bO88575 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a20bO88575 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a20bO88575 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a20bO88575 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a20bO88575 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.27■□□□□ 0.84
Slc6a20bO88575 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a20bO88575 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.27■□□□□ 0.84
Slc6a20bO88575 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.27■□□□□ 0.84
Slc6a20bO88575 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Slc6a20bO88575 Timm23-208ENSMUST00000226683 750 ntBASIC20.27■□□□□ 0.84
Slc6a20bO88575 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Slc6a20bO88575 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a20bO88575 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a20bO88575 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a20bO88575 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.26■□□□□ 0.83
Slc6a20bO88575 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.26■□□□□ 0.83
Slc6a20bO88575 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a20bO88575 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a20bO88575 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.26■□□□□ 0.83
Slc6a20bO88575 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Slc6a20bO88575 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a20bO88575 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a20bO88575 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.26■□□□□ 0.83
Slc6a20bO88575 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a20bO88575 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a20bO88575 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Slc6a20bO88575 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a20bO88575 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Slc6a20bO88575 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a20bO88575 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms