Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tgfbr3O88393 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tgfbr3O88393 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tgfbr3O88393 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tgfbr3O88393 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tgfbr3O88393 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.66■□□□□ 0.42
Tgfbr3O88393 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Tgfbr3O88393 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tgfbr3O88393 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tgfbr3O88393 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tgfbr3O88393 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tgfbr3O88393 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tgfbr3O88393 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tgfbr3O88393 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfbr3O88393 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfbr3O88393 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfbr3O88393 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfbr3O88393 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfbr3O88393 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfbr3O88393 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfbr3O88393 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfbr3O88393 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.65■□□□□ 0.42
Tgfbr3O88393 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfbr3O88393 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfbr3O88393 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfbr3O88393 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfbr3O88393 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfbr3O88393 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfbr3O88393 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tgfbr3O88393 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Tgfbr3O88393 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.64■□□□□ 0.41
Tgfbr3O88393 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.64■□□□□ 0.41
Tgfbr3O88393 Mir5122-201ENSMUST00000175004 89 ntBASIC17.64■□□□□ 0.41
Tgfbr3O88393 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tgfbr3O88393 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tgfbr3O88393 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tgfbr3O88393 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.63■□□□□ 0.41
Tgfbr3O88393 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tgfbr3O88393 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tgfbr3O88393 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tgfbr3O88393 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tgfbr3O88393 Gm11643-201ENSMUST00000119578 864 ntBASIC17.63■□□□□ 0.41
Tgfbr3O88393 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Tgfbr3O88393 Gm9987-201ENSMUST00000069768 567 ntBASIC17.63■□□□□ 0.41
Tgfbr3O88393 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tgfbr3O88393 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tgfbr3O88393 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tgfbr3O88393 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Tgfbr3O88393 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tgfbr3O88393 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tgfbr3O88393 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Tgfbr3O88393 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Tgfbr3O88393 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Tgfbr3O88393 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.62■□□□□ 0.41
Tgfbr3O88393 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tgfbr3O88393 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Tgfbr3O88393 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tgfbr3O88393 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tgfbr3O88393 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tgfbr3O88393 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Tgfbr3O88393 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tgfbr3O88393 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tgfbr3O88393 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tgfbr3O88393 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tgfbr3O88393 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tgfbr3O88393 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tgfbr3O88393 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Tgfbr3O88393 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.61■□□□□ 0.41
Tgfbr3O88393 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tgfbr3O88393 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Tgfbr3O88393 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tgfbr3O88393 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tgfbr3O88393 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.6■□□□□ 0.41
Tgfbr3O88393 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tgfbr3O88393 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tgfbr3O88393 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tgfbr3O88393 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tgfbr3O88393 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms