Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pdlim1O70400 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.29■□□□□ 0.52
Pdlim1O70400 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim1O70400 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.29■□□□□ 0.52
Pdlim1O70400 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim1O70400 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim1O70400 Gm13148-201ENSMUST00000118892 745 ntBASIC18.29■□□□□ 0.52
Pdlim1O70400 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.29■□□□□ 0.52
Pdlim1O70400 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim1O70400 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.29■□□□□ 0.52
Pdlim1O70400 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim1O70400 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim1O70400 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pdlim1O70400 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim1O70400 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim1O70400 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim1O70400 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim1O70400 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim1O70400 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim1O70400 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim1O70400 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim1O70400 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pdlim1O70400 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim1O70400 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim1O70400 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim1O70400 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.28■□□□□ 0.52
Pdlim1O70400 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim1O70400 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim1O70400 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim1O70400 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim1O70400 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim1O70400 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim1O70400 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim1O70400 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim1O70400 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Pdlim1O70400 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim1O70400 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim1O70400 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pdlim1O70400 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.27■□□□□ 0.51
Pdlim1O70400 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Pdlim1O70400 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.27■□□□□ 0.51
Pdlim1O70400 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pdlim1O70400 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pdlim1O70400 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim1O70400 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim1O70400 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.26■□□□□ 0.51
Pdlim1O70400 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim1O70400 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim1O70400 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim1O70400 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.26■□□□□ 0.51
Pdlim1O70400 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Pdlim1O70400 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim1O70400 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.26■□□□□ 0.51
Pdlim1O70400 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pdlim1O70400 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim1O70400 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Pdlim1O70400 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Pdlim1O70400 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim1O70400 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim1O70400 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.25■□□□□ 0.51
Pdlim1O70400 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pdlim1O70400 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim1O70400 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim1O70400 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim1O70400 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pdlim1O70400 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim1O70400 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim1O70400 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim1O70400 Gm22325-201ENSMUST00000158904 308 ntBASIC18.24■□□□□ 0.51
Pdlim1O70400 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.24■□□□□ 0.51
Pdlim1O70400 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim1O70400 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Pdlim1O70400 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Pdlim1O70400 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim1O70400 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.24■□□□□ 0.51
Pdlim1O70400 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim1O70400 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.24■□□□□ 0.51
Pdlim1O70400 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim1O70400 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim1O70400 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim1O70400 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim1O70400 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim1O70400 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim1O70400 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim1O70400 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
Pdlim1O70400 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Pdlim1O70400 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim1O70400 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pdlim1O70400 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pdlim1O70400 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim1O70400 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim1O70400 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim1O70400 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim1O70400 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim1O70400 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim1O70400 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim1O70400 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim1O70400 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim1O70400 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim1O70400 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms