Protein–RNA interactions for Protein: O70228

Atp9a, Probable phospholipid-transporting ATPase IIA, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp9aO70228 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atp9aO70228 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.58■□□□□ 0.89
Atp9aO70228 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atp9aO70228 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Atp9aO70228 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Atp9aO70228 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.58■□□□□ 0.88
Atp9aO70228 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atp9aO70228 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.58■□□□□ 0.88
Atp9aO70228 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp9aO70228 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Atp9aO70228 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Atp9aO70228 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp9aO70228 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.57■□□□□ 0.88
Atp9aO70228 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.57■□□□□ 0.88
Atp9aO70228 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.57■□□□□ 0.88
Atp9aO70228 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Atp9aO70228 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp9aO70228 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp9aO70228 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp9aO70228 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp9aO70228 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp9aO70228 Gm11249-201ENSMUST00000117071 859 ntBASIC20.56■□□□□ 0.88
Atp9aO70228 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atp9aO70228 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Atp9aO70228 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Atp9aO70228 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Atp9aO70228 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp9aO70228 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp9aO70228 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp9aO70228 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atp9aO70228 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atp9aO70228 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atp9aO70228 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.55■□□□□ 0.88
Atp9aO70228 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Atp9aO70228 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atp9aO70228 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Atp9aO70228 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atp9aO70228 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atp9aO70228 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Atp9aO70228 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atp9aO70228 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Atp9aO70228 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp9aO70228 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Atp9aO70228 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp9aO70228 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.54■□□□□ 0.88
Atp9aO70228 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Atp9aO70228 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.54■□□□□ 0.88
Atp9aO70228 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp9aO70228 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp9aO70228 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp9aO70228 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp9aO70228 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp9aO70228 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp9aO70228 Gm2399-201ENSMUST00000104944 225 ntBASIC20.53■□□□□ 0.88
Atp9aO70228 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.53■□□□□ 0.88
Atp9aO70228 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.53■□□□□ 0.88
Atp9aO70228 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp9aO70228 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp9aO70228 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.53■□□□□ 0.88
Atp9aO70228 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.53■□□□□ 0.88
Atp9aO70228 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp9aO70228 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.53■□□□□ 0.88
Atp9aO70228 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp9aO70228 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atp9aO70228 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp9aO70228 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.52■□□□□ 0.88
Atp9aO70228 Gm5643-201ENSMUST00000117081 966 ntBASIC20.52■□□□□ 0.88
Atp9aO70228 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp9aO70228 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp9aO70228 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp9aO70228 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp9aO70228 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp9aO70228 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Atp9aO70228 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Atp9aO70228 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp9aO70228 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Atp9aO70228 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Atp9aO70228 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Atp9aO70228 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp9aO70228 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.51■□□□□ 0.87
Atp9aO70228 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
Atp9aO70228 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp9aO70228 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Atp9aO70228 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atp9aO70228 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp9aO70228 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp9aO70228 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atp9aO70228 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp9aO70228 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp9aO70228 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.5■□□□□ 0.87
Atp9aO70228 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atp9aO70228 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp9aO70228 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp9aO70228 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atp9aO70228 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.5■□□□□ 0.87
Atp9aO70228 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.5■□□□□ 0.87
Atp9aO70228 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp9aO70228 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp9aO70228 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Atp9aO70228 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms