Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
Pdlim3O70209 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.8■□□□□ 0.28
Pdlim3O70209 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim3O70209 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim3O70209 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim3O70209 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim3O70209 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim3O70209 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim3O70209 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim3O70209 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim3O70209 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim3O70209 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim3O70209 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.79■□□□□ 0.28
Pdlim3O70209 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim3O70209 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim3O70209 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pdlim3O70209 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim3O70209 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim3O70209 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.79■□□□□ 0.28
Pdlim3O70209 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim3O70209 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.79■□□□□ 0.28
Pdlim3O70209 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.79■□□□□ 0.28
Pdlim3O70209 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim3O70209 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim3O70209 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pdlim3O70209 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdlim3O70209 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pdlim3O70209 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim3O70209 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim3O70209 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.78■□□□□ 0.28
Pdlim3O70209 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim3O70209 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim3O70209 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.78■□□□□ 0.28
Pdlim3O70209 Gm43137-201ENSMUST00000198052 594 ntBASIC16.78■□□□□ 0.28
Pdlim3O70209 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.78■□□□□ 0.28
Pdlim3O70209 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Pdlim3O70209 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim3O70209 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Pdlim3O70209 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim3O70209 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pdlim3O70209 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim3O70209 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim3O70209 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Pdlim3O70209 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim3O70209 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim3O70209 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim3O70209 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim3O70209 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim3O70209 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim3O70209 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim3O70209 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pdlim3O70209 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim3O70209 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim3O70209 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Pdlim3O70209 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.77■□□□□ 0.28
Pdlim3O70209 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim3O70209 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pdlim3O70209 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pdlim3O70209 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pdlim3O70209 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pdlim3O70209 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Pdlim3O70209 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.77■□□□□ 0.27
Pdlim3O70209 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pdlim3O70209 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim3O70209 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim3O70209 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim3O70209 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim3O70209 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim3O70209 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim3O70209 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.76■□□□□ 0.27
Pdlim3O70209 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.76■□□□□ 0.27
Pdlim3O70209 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pdlim3O70209 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Pdlim3O70209 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pdlim3O70209 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim3O70209 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pdlim3O70209 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim3O70209 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim3O70209 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim3O70209 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.75■□□□□ 0.27
Pdlim3O70209 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim3O70209 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim3O70209 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim3O70209 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim3O70209 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim3O70209 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim3O70209 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pdlim3O70209 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pdlim3O70209 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms