Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Gm45906-201ENSMUST00000208911 1430 ntBASIC22.72■■□□□ 1.23
Mmp8O70138 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Mmp8O70138 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Mmp8O70138 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Mmp8O70138 AC107452.1-201ENSMUST00000227963 481 ntBASIC22.71■■□□□ 1.23
Mmp8O70138 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Mmp8O70138 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Mmp8O70138 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Mmp8O70138 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Mmp8O70138 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Mmp8O70138 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Mmp8O70138 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Mmp8O70138 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Mmp8O70138 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Mmp8O70138 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Mmp8O70138 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Mmp8O70138 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Mmp8O70138 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Mmp8O70138 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Mmp8O70138 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Mmp8O70138 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Mmp8O70138 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Mmp8O70138 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Mmp8O70138 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Mmp8O70138 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Mmp8O70138 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Mmp8O70138 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Mmp8O70138 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.69■■□□□ 1.22
Mmp8O70138 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Mmp8O70138 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Mmp8O70138 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Mmp8O70138 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Mmp8O70138 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC22.68■■□□□ 1.22
Mmp8O70138 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Mmp8O70138 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC22.68■■□□□ 1.22
Mmp8O70138 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Mmp8O70138 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Mmp8O70138 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Mmp8O70138 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Mmp8O70138 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Mmp8O70138 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Mmp8O70138 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Mmp8O70138 Gm42922-201ENSMUST00000195887 2078 ntBASIC22.67■■□□□ 1.22
Mmp8O70138 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC22.66■■□□□ 1.22
Mmp8O70138 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Mmp8O70138 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Mmp8O70138 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC22.66■■□□□ 1.22
Mmp8O70138 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Mmp8O70138 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Mmp8O70138 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Mmp8O70138 Gm5112-201ENSMUST00000204407 2368 ntBASIC22.66■■□□□ 1.22
Mmp8O70138 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
Mmp8O70138 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC22.66■■□□□ 1.22
Mmp8O70138 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Mmp8O70138 Gm26524-201ENSMUST00000192339 390 ntBASIC22.66■■□□□ 1.22
Mmp8O70138 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Mmp8O70138 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Mmp8O70138 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Mmp8O70138 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Mmp8O70138 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Mmp8O70138 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Mmp8O70138 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Mmp8O70138 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
Mmp8O70138 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Mmp8O70138 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
Mmp8O70138 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Mmp8O70138 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Mmp8O70138 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22.65■■□□□ 1.22
Mmp8O70138 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Mmp8O70138 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Mmp8O70138 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Mmp8O70138 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Mmp8O70138 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Mmp8O70138 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Mmp8O70138 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Mmp8O70138 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Mmp8O70138 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
Mmp8O70138 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Mmp8O70138 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC22.64■■□□□ 1.21
Mmp8O70138 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Mmp8O70138 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Mmp8O70138 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Mmp8O70138 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Mmp8O70138 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Mmp8O70138 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Mmp8O70138 Gm43213-201ENSMUST00000151866 1790 ntBASIC22.63■■□□□ 1.21
Mmp8O70138 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Mmp8O70138 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Mmp8O70138 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Mmp8O70138 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Mmp8O70138 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Mmp8O70138 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Mmp8O70138 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Mmp8O70138 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Mmp8O70138 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Mmp8O70138 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Mmp8O70138 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Mmp8O70138 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Mmp8O70138 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
Mmp8O70138 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms