Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Alx3O70137 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Alx3O70137 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Alx3O70137 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.79■□□□□ 0.28
Alx3O70137 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Alx3O70137 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Alx3O70137 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Alx3O70137 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx3O70137 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx3O70137 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Alx3O70137 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Alx3O70137 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Alx3O70137 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Alx3O70137 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx3O70137 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Alx3O70137 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Alx3O70137 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Alx3O70137 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx3O70137 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx3O70137 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx3O70137 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx3O70137 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx3O70137 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx3O70137 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx3O70137 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Alx3O70137 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx3O70137 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Alx3O70137 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx3O70137 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx3O70137 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Alx3O70137 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Alx3O70137 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
Alx3O70137 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.77■□□□□ 0.28
Alx3O70137 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.77■□□□□ 0.28
Alx3O70137 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.77■□□□□ 0.28
Alx3O70137 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx3O70137 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx3O70137 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Alx3O70137 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Alx3O70137 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Alx3O70137 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Alx3O70137 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Alx3O70137 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.77■□□□□ 0.27
Alx3O70137 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Alx3O70137 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Alx3O70137 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Alx3O70137 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Alx3O70137 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Alx3O70137 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.76■□□□□ 0.27
Alx3O70137 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Alx3O70137 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Alx3O70137 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Alx3O70137 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Alx3O70137 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Alx3O70137 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Alx3O70137 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.76■□□□□ 0.27
Alx3O70137 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.76■□□□□ 0.27
Alx3O70137 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Alx3O70137 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Alx3O70137 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Alx3O70137 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.76■□□□□ 0.27
Alx3O70137 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Alx3O70137 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Alx3O70137 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Alx3O70137 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Alx3O70137 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.75■□□□□ 0.27
Alx3O70137 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.75■□□□□ 0.27
Alx3O70137 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Alx3O70137 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Alx3O70137 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Alx3O70137 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Alx3O70137 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.75■□□□□ 0.27
Alx3O70137 Gm45417-201ENSMUST00000209533 758 ntBASIC16.75■□□□□ 0.27
Alx3O70137 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Alx3O70137 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Alx3O70137 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.75■□□□□ 0.27
Alx3O70137 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Alx3O70137 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Alx3O70137 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Alx3O70137 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Alx3O70137 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.74■□□□□ 0.27
Alx3O70137 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.74■□□□□ 0.27
Alx3O70137 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.74■□□□□ 0.27
Alx3O70137 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Alx3O70137 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Alx3O70137 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.74■□□□□ 0.27
Alx3O70137 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Alx3O70137 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Alx3O70137 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Alx3O70137 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Alx3O70137 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Alx3O70137 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Alx3O70137 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Alx3O70137 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Alx3O70137 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Alx3O70137 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Alx3O70137 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Alx3O70137 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alx3O70137 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Alx3O70137 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms