Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh5O55240 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh5O55240 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rdh5O55240 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh5O55240 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rdh5O55240 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rdh5O55240 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rdh5O55240 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rdh5O55240 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Rdh5O55240 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rdh5O55240 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.56■□□□□ 0.4
Rdh5O55240 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rdh5O55240 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rdh5O55240 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rdh5O55240 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh5O55240 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh5O55240 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh5O55240 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Rdh5O55240 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.55■□□□□ 0.4
Rdh5O55240 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh5O55240 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.55■□□□□ 0.4
Rdh5O55240 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh5O55240 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Rdh5O55240 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh5O55240 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh5O55240 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh5O55240 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh5O55240 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rdh5O55240 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh5O55240 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh5O55240 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh5O55240 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh5O55240 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.54■□□□□ 0.4
Rdh5O55240 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rdh5O55240 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh5O55240 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh5O55240 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.54■□□□□ 0.4
Rdh5O55240 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh5O55240 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh5O55240 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh5O55240 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Rdh5O55240 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh5O55240 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh5O55240 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh5O55240 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh5O55240 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh5O55240 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh5O55240 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.53■□□□□ 0.4
Rdh5O55240 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Rdh5O55240 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh5O55240 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.53■□□□□ 0.4
Rdh5O55240 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rdh5O55240 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Rdh5O55240 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh5O55240 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh5O55240 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh5O55240 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh5O55240 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh5O55240 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rdh5O55240 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh5O55240 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.52■□□□□ 0.4
Rdh5O55240 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh5O55240 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.52■□□□□ 0.4
Rdh5O55240 Gm37179-201ENSMUST00000194862 823 ntBASIC17.52■□□□□ 0.4
Rdh5O55240 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Rdh5O55240 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh5O55240 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh5O55240 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh5O55240 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rdh5O55240 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.52■□□□□ 0.4
Rdh5O55240 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Rdh5O55240 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.52■□□□□ 0.39
Rdh5O55240 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Rdh5O55240 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rdh5O55240 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rdh5O55240 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rdh5O55240 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.51■□□□□ 0.39
Rdh5O55240 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh5O55240 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rdh5O55240 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rdh5O55240 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh5O55240 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh5O55240 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh5O55240 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh5O55240 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh5O55240 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Rdh5O55240 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh5O55240 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.5■□□□□ 0.39
Rdh5O55240 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh5O55240 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh5O55240 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh5O55240 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh5O55240 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh5O55240 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh5O55240 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.5■□□□□ 0.39
Rdh5O55240 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.5■□□□□ 0.39
Rdh5O55240 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh5O55240 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh5O55240 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh5O55240 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms