Protein–RNA interactions for Protein: O55229

Chkb, Choline/ethanolamine kinase, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkbO55229 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ChkbO55229 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ChkbO55229 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ChkbO55229 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ChkbO55229 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ChkbO55229 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.71■□□□□ 0.75
ChkbO55229 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ChkbO55229 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ChkbO55229 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ChkbO55229 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ChkbO55229 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ChkbO55229 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChkbO55229 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ChkbO55229 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChkbO55229 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChkbO55229 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChkbO55229 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ChkbO55229 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChkbO55229 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChkbO55229 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChkbO55229 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ChkbO55229 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.7■□□□□ 0.74
ChkbO55229 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChkbO55229 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChkbO55229 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChkbO55229 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.7■□□□□ 0.74
ChkbO55229 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChkbO55229 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChkbO55229 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ChkbO55229 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ChkbO55229 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ChkbO55229 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ChkbO55229 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ChkbO55229 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ChkbO55229 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.69■□□□□ 0.74
ChkbO55229 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ChkbO55229 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ChkbO55229 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ChkbO55229 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ChkbO55229 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ChkbO55229 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ChkbO55229 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ChkbO55229 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChkbO55229 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChkbO55229 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChkbO55229 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChkbO55229 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ChkbO55229 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.68■□□□□ 0.74
ChkbO55229 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.68■□□□□ 0.74
ChkbO55229 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ChkbO55229 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.68■□□□□ 0.74
ChkbO55229 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.68■□□□□ 0.74
ChkbO55229 Gm43173-201ENSMUST00000202246 593 ntBASIC19.68■□□□□ 0.74
ChkbO55229 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChkbO55229 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChkbO55229 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChkbO55229 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChkbO55229 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChkbO55229 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ChkbO55229 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChkbO55229 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChkbO55229 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ChkbO55229 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ChkbO55229 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChkbO55229 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ChkbO55229 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.67■□□□□ 0.74
ChkbO55229 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChkbO55229 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.67■□□□□ 0.74
ChkbO55229 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChkbO55229 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChkbO55229 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.67■□□□□ 0.74
ChkbO55229 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.67■□□□□ 0.74
ChkbO55229 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChkbO55229 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChkbO55229 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
ChkbO55229 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChkbO55229 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ChkbO55229 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChkbO55229 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChkbO55229 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChkbO55229 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.66■□□□□ 0.74
ChkbO55229 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ChkbO55229 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ChkbO55229 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
ChkbO55229 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.66■□□□□ 0.74
ChkbO55229 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.66■□□□□ 0.74
ChkbO55229 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ChkbO55229 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.66■□□□□ 0.74
ChkbO55229 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChkbO55229 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChkbO55229 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ChkbO55229 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChkbO55229 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChkbO55229 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChkbO55229 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.66■□□□□ 0.74
ChkbO55229 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChkbO55229 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChkbO55229 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ChkbO55229 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ChkbO55229 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms