Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.69■□□□□ 0.1
Cxcl13O55038 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cxcl13O55038 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl13O55038 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl13O55038 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl13O55038 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl13O55038 Gm2399-201ENSMUST00000104944 225 ntBASIC15.69■□□□□ 0.1
Cxcl13O55038 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl13O55038 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.69■□□□□ 0.1
Cxcl13O55038 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl13O55038 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.69■□□□□ 0.1
Cxcl13O55038 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl13O55038 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl13O55038 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl13O55038 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl13O55038 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl13O55038 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl13O55038 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl13O55038 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl13O55038 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl13O55038 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl13O55038 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Cxcl13O55038 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl13O55038 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl13O55038 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.68■□□□□ 0.1
Cxcl13O55038 Gm11249-201ENSMUST00000117071 859 ntBASIC15.68■□□□□ 0.1
Cxcl13O55038 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.68■□□□□ 0.1
Cxcl13O55038 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl13O55038 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.68■□□□□ 0.1
Cxcl13O55038 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl13O55038 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl13O55038 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl13O55038 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl13O55038 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl13O55038 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.67■□□□□ 0.1
Cxcl13O55038 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl13O55038 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.67■□□□□ 0.1
Cxcl13O55038 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl13O55038 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.67■□□□□ 0.1
Cxcl13O55038 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl13O55038 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl13O55038 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl13O55038 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl13O55038 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl13O55038 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl13O55038 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl13O55038 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl13O55038 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl13O55038 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl13O55038 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl13O55038 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl13O55038 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl13O55038 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl13O55038 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl13O55038 Gm5643-201ENSMUST00000117081 966 ntBASIC15.66■□□□□ 0.1
Cxcl13O55038 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl13O55038 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl13O55038 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl13O55038 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl13O55038 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl13O55038 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl13O55038 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl13O55038 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl13O55038 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl13O55038 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl13O55038 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl13O55038 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.65■□□□□ 0.1
Cxcl13O55038 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl13O55038 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl13O55038 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl13O55038 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl13O55038 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
Cxcl13O55038 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl13O55038 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl13O55038 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cxcl13O55038 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Cxcl13O55038 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Cxcl13O55038 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cxcl13O55038 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cxcl13O55038 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cxcl13O55038 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cxcl13O55038 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.64■□□□□ 0.09
Cxcl13O55038 Gm18666-201ENSMUST00000190039 958 ntBASIC15.64■□□□□ 0.09
Cxcl13O55038 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cxcl13O55038 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cxcl13O55038 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Cxcl13O55038 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cxcl13O55038 Flg-201ENSMUST00000050758 1488 ntBASIC15.64■□□□□ 0.09
Cxcl13O55038 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cxcl13O55038 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.64■□□□□ 0.09
Cxcl13O55038 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cxcl13O55038 Gm22325-201ENSMUST00000158904 308 ntBASIC15.63■□□□□ 0.09
Cxcl13O55038 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl13O55038 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl13O55038 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl13O55038 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl13O55038 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl13O55038 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl13O55038 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cxcl13O55038 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms