Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cntnap1O54991 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cntnap1O54991 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC24.26■■□□□ 1.47
Cntnap1O54991 Gm18115-201ENSMUST00000221209 621 ntBASIC24.26■■□□□ 1.47
Cntnap1O54991 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC24.26■■□□□ 1.47
Cntnap1O54991 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cntnap1O54991 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cntnap1O54991 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cntnap1O54991 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cntnap1O54991 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Cntnap1O54991 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cntnap1O54991 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cntnap1O54991 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Cntnap1O54991 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC24.25■■□□□ 1.47
Cntnap1O54991 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
Cntnap1O54991 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cntnap1O54991 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.24■■□□□ 1.47
Cntnap1O54991 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC24.24■■□□□ 1.47
Cntnap1O54991 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
Cntnap1O54991 Gm38285-201ENSMUST00000192928 922 ntBASIC24.24■■□□□ 1.47
Cntnap1O54991 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC24.24■■□□□ 1.47
Cntnap1O54991 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cntnap1O54991 AC164629.2-201ENSMUST00000217916 270 ntBASIC24.23■■□□□ 1.47
Cntnap1O54991 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cntnap1O54991 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cntnap1O54991 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cntnap1O54991 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Cntnap1O54991 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cntnap1O54991 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Cntnap1O54991 Gm4217-201ENSMUST00000182243 1002 ntBASIC24.22■■□□□ 1.47
Cntnap1O54991 Gm17808-201ENSMUST00000200859 894 ntBASIC24.22■■□□□ 1.47
Cntnap1O54991 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cntnap1O54991 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cntnap1O54991 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cntnap1O54991 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cntnap1O54991 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cntnap1O54991 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cntnap1O54991 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cntnap1O54991 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Cntnap1O54991 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cntnap1O54991 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cntnap1O54991 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
Cntnap1O54991 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC24.21■■□□□ 1.47
Cntnap1O54991 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Cntnap1O54991 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cntnap1O54991 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cntnap1O54991 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Cntnap1O54991 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Cntnap1O54991 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC24.21■■□□□ 1.47
Cntnap1O54991 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cntnap1O54991 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Cntnap1O54991 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cntnap1O54991 Gm27357-201ENSMUST00000183754 135 ntBASIC24.2■■□□□ 1.46
Cntnap1O54991 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cntnap1O54991 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cntnap1O54991 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cntnap1O54991 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cntnap1O54991 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC24.19■■□□□ 1.46
Cntnap1O54991 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Cntnap1O54991 Gm38027-201ENSMUST00000192315 235 ntBASIC24.19■■□□□ 1.46
Cntnap1O54991 Gm20100-201ENSMUST00000209418 2272 ntBASIC24.19■■□□□ 1.46
Cntnap1O54991 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cntnap1O54991 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Cntnap1O54991 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Cntnap1O54991 Gm9013-201ENSMUST00000132939 882 ntBASIC24.18■■□□□ 1.46
Cntnap1O54991 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cntnap1O54991 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Cntnap1O54991 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Cntnap1O54991 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Cntnap1O54991 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC24.17■■□□□ 1.46
Cntnap1O54991 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC24.17■■□□□ 1.46
Cntnap1O54991 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC24.17■■□□□ 1.46
Cntnap1O54991 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC24.17■■□□□ 1.46
Cntnap1O54991 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC24.17■■□□□ 1.46
Cntnap1O54991 Gm16061-201ENSMUST00000122167 857 ntBASIC24.16■■□□□ 1.46
Cntnap1O54991 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC24.16■■□□□ 1.46
Cntnap1O54991 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Cntnap1O54991 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Cntnap1O54991 Gm21559-201ENSMUST00000220638 855 ntBASIC24.16■■□□□ 1.46
Cntnap1O54991 Gm8587-201ENSMUST00000076538 843 ntBASIC24.16■■□□□ 1.46
Cntnap1O54991 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cntnap1O54991 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cntnap1O54991 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cntnap1O54991 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Cntnap1O54991 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cntnap1O54991 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cntnap1O54991 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
Cntnap1O54991 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Cntnap1O54991 Mir3081-201ENSMUST00000175305 84 ntBASIC24.16■■□□□ 1.46
Cntnap1O54991 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
Cntnap1O54991 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cntnap1O54991 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cntnap1O54991 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cntnap1O54991 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cntnap1O54991 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
Cntnap1O54991 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC24.15■■□□□ 1.46
Cntnap1O54991 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cntnap1O54991 Spr-ps1-201ENSMUST00000089584 605 ntBASIC24.15■■□□□ 1.46
Cntnap1O54991 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC24.14■■□□□ 1.46
Cntnap1O54991 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 114.4 ms