Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Rnf13O54965 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf13O54965 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf13O54965 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf13O54965 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf13O54965 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf13O54965 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.8■□□□□ 0.28
Rnf13O54965 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf13O54965 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rnf13O54965 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf13O54965 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rnf13O54965 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rnf13O54965 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf13O54965 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rnf13O54965 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rnf13O54965 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf13O54965 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rnf13O54965 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf13O54965 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rnf13O54965 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf13O54965 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf13O54965 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Rnf13O54965 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rnf13O54965 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf13O54965 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf13O54965 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf13O54965 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf13O54965 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.79■□□□□ 0.28
Rnf13O54965 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rnf13O54965 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf13O54965 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Rnf13O54965 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rnf13O54965 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.79■□□□□ 0.28
Rnf13O54965 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf13O54965 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.79■□□□□ 0.28
Rnf13O54965 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf13O54965 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf13O54965 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf13O54965 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf13O54965 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf13O54965 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf13O54965 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf13O54965 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf13O54965 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Rnf13O54965 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.78■□□□□ 0.28
Rnf13O54965 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf13O54965 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rnf13O54965 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf13O54965 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.78■□□□□ 0.28
Rnf13O54965 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.78■□□□□ 0.28
Rnf13O54965 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf13O54965 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf13O54965 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Rnf13O54965 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf13O54965 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf13O54965 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rnf13O54965 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf13O54965 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf13O54965 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rnf13O54965 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf13O54965 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf13O54965 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.77■□□□□ 0.28
Rnf13O54965 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf13O54965 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf13O54965 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf13O54965 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.77■□□□□ 0.28
Rnf13O54965 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf13O54965 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.77■□□□□ 0.28
Rnf13O54965 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.77■□□□□ 0.27
Rnf13O54965 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf13O54965 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf13O54965 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf13O54965 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf13O54965 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf13O54965 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Rnf13O54965 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf13O54965 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf13O54965 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.76■□□□□ 0.27
Rnf13O54965 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf13O54965 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf13O54965 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf13O54965 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf13O54965 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf13O54965 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf13O54965 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf13O54965 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rnf13O54965 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf13O54965 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf13O54965 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.76■□□□□ 0.27
Rnf13O54965 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf13O54965 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf13O54965 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf13O54965 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf13O54965 Gm7860-201ENSMUST00000121190 879 ntBASIC16.75■□□□□ 0.27
Rnf13O54965 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.75■□□□□ 0.27
Rnf13O54965 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf13O54965 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rnf13O54965 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf13O54965 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf13O54965 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms