Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.84■□□□□ 0.61
Limk2O54785 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Limk2O54785 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.84■□□□□ 0.61
Limk2O54785 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.84■□□□□ 0.61
Limk2O54785 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Limk2O54785 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Limk2O54785 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Limk2O54785 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.84■□□□□ 0.61
Limk2O54785 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.84■□□□□ 0.61
Limk2O54785 Gm8520-201ENSMUST00000186517 868 ntBASIC18.84■□□□□ 0.61
Limk2O54785 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Limk2O54785 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Limk2O54785 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Limk2O54785 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Limk2O54785 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.84■□□□□ 0.61
Limk2O54785 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Limk2O54785 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Limk2O54785 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Limk2O54785 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Limk2O54785 Gm5408-201ENSMUST00000197998 747 ntBASIC18.83■□□□□ 0.6
Limk2O54785 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Limk2O54785 Gm6365-201ENSMUST00000054711 744 ntBASIC18.83■□□□□ 0.6
Limk2O54785 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Limk2O54785 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Limk2O54785 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Limk2O54785 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Limk2O54785 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Limk2O54785 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Limk2O54785 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Limk2O54785 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Limk2O54785 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Limk2O54785 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Limk2O54785 Gm12527-201ENSMUST00000117967 564 ntBASIC18.82■□□□□ 0.6
Limk2O54785 Gm13148-201ENSMUST00000118892 745 ntBASIC18.82■□□□□ 0.6
Limk2O54785 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.82■□□□□ 0.6
Limk2O54785 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Limk2O54785 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Limk2O54785 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Limk2O54785 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Limk2O54785 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Limk2O54785 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Limk2O54785 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.81■□□□□ 0.6
Limk2O54785 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Limk2O54785 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Limk2O54785 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.81■□□□□ 0.6
Limk2O54785 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Limk2O54785 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.81■□□□□ 0.6
Limk2O54785 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Limk2O54785 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.81■□□□□ 0.6
Limk2O54785 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.81■□□□□ 0.6
Limk2O54785 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Limk2O54785 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Limk2O54785 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Limk2O54785 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Limk2O54785 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Limk2O54785 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Limk2O54785 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Limk2O54785 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Limk2O54785 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.8■□□□□ 0.6
Limk2O54785 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Limk2O54785 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Limk2O54785 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Limk2O54785 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.8■□□□□ 0.6
Limk2O54785 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Limk2O54785 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Limk2O54785 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Limk2O54785 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Limk2O54785 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Limk2O54785 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Limk2O54785 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Limk2O54785 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.79■□□□□ 0.6
Limk2O54785 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Limk2O54785 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Limk2O54785 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.79■□□□□ 0.6
Limk2O54785 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Limk2O54785 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Limk2O54785 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.79■□□□□ 0.6
Limk2O54785 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Limk2O54785 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Limk2O54785 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Limk2O54785 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Limk2O54785 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Limk2O54785 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limk2O54785 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Limk2O54785 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Limk2O54785 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limk2O54785 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.78■□□□□ 0.6
Limk2O54785 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limk2O54785 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limk2O54785 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limk2O54785 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limk2O54785 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.78■□□□□ 0.6
Limk2O54785 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limk2O54785 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Limk2O54785 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limk2O54785 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Limk2O54785 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limk2O54785 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limk2O54785 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Limk2O54785 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms