Protein–RNA interactions for Protein: O35906

Spib, Transcription factor Spi-B, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpibO35906 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SpibO35906 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.56■□□□□ 0.88
SpibO35906 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SpibO35906 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SpibO35906 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SpibO35906 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SpibO35906 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SpibO35906 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.56■□□□□ 0.88
SpibO35906 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SpibO35906 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SpibO35906 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SpibO35906 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.55■□□□□ 0.88
SpibO35906 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SpibO35906 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SpibO35906 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SpibO35906 Gm7977-201ENSMUST00000193787 748 ntBASIC20.55■□□□□ 0.88
SpibO35906 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.55■□□□□ 0.88
SpibO35906 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.55■□□□□ 0.88
SpibO35906 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SpibO35906 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SpibO35906 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SpibO35906 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SpibO35906 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SpibO35906 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SpibO35906 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SpibO35906 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.54■□□□□ 0.88
SpibO35906 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SpibO35906 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SpibO35906 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SpibO35906 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpibO35906 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SpibO35906 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.53■□□□□ 0.88
SpibO35906 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SpibO35906 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SpibO35906 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SpibO35906 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.53■□□□□ 0.88
SpibO35906 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SpibO35906 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.53■□□□□ 0.88
SpibO35906 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.53■□□□□ 0.88
SpibO35906 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpibO35906 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpibO35906 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.53■□□□□ 0.88
SpibO35906 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpibO35906 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpibO35906 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SpibO35906 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.53■□□□□ 0.88
SpibO35906 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpibO35906 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SpibO35906 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SpibO35906 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SpibO35906 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SpibO35906 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SpibO35906 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SpibO35906 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.52■□□□□ 0.88
SpibO35906 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.52■□□□□ 0.88
SpibO35906 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SpibO35906 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SpibO35906 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SpibO35906 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SpibO35906 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SpibO35906 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SpibO35906 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SpibO35906 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SpibO35906 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SpibO35906 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SpibO35906 Mir5122-201ENSMUST00000175004 89 ntBASIC20.51■□□□□ 0.87
SpibO35906 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SpibO35906 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SpibO35906 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SpibO35906 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SpibO35906 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SpibO35906 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SpibO35906 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SpibO35906 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SpibO35906 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SpibO35906 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SpibO35906 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SpibO35906 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SpibO35906 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SpibO35906 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SpibO35906 Gm13836-201ENSMUST00000121159 501 ntBASIC20.5■□□□□ 0.87
SpibO35906 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.5■□□□□ 0.87
SpibO35906 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SpibO35906 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SpibO35906 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SpibO35906 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SpibO35906 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SpibO35906 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SpibO35906 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SpibO35906 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SpibO35906 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SpibO35906 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SpibO35906 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SpibO35906 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SpibO35906 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SpibO35906 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SpibO35906 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SpibO35906 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SpibO35906 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SpibO35906 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms