Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn3O35701 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Matn3O35701 Gm9870-201ENSMUST00000063874 645 ntBASIC16.82■□□□□ 0.28
Matn3O35701 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn3O35701 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Matn3O35701 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn3O35701 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Matn3O35701 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn3O35701 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn3O35701 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Matn3O35701 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.81■□□□□ 0.28
Matn3O35701 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Matn3O35701 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.81■□□□□ 0.28
Matn3O35701 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Matn3O35701 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Matn3O35701 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Matn3O35701 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Matn3O35701 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Matn3O35701 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Matn3O35701 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.81■□□□□ 0.28
Matn3O35701 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.81■□□□□ 0.28
Matn3O35701 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
Matn3O35701 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.81■□□□□ 0.28
Matn3O35701 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.8■□□□□ 0.28
Matn3O35701 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Matn3O35701 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn3O35701 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn3O35701 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn3O35701 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn3O35701 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn3O35701 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.8■□□□□ 0.28
Matn3O35701 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn3O35701 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Matn3O35701 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Matn3O35701 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.8■□□□□ 0.28
Matn3O35701 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.8■□□□□ 0.28
Matn3O35701 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn3O35701 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn3O35701 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn3O35701 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Matn3O35701 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Matn3O35701 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Matn3O35701 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Matn3O35701 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Matn3O35701 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Matn3O35701 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Matn3O35701 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Matn3O35701 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Matn3O35701 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Matn3O35701 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Matn3O35701 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Matn3O35701 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Matn3O35701 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Matn3O35701 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Matn3O35701 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Matn3O35701 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Matn3O35701 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Matn3O35701 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Matn3O35701 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Matn3O35701 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Matn3O35701 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.78■□□□□ 0.28
Matn3O35701 Gm40881-201ENSMUST00000223397 166 ntBASIC16.78■□□□□ 0.28
Matn3O35701 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Matn3O35701 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Matn3O35701 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Matn3O35701 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
Matn3O35701 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Matn3O35701 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Matn3O35701 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Matn3O35701 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.77■□□□□ 0.28
Matn3O35701 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Matn3O35701 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Matn3O35701 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Matn3O35701 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Matn3O35701 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Matn3O35701 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Matn3O35701 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Matn3O35701 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Matn3O35701 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.77■□□□□ 0.27
Matn3O35701 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Matn3O35701 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Matn3O35701 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Matn3O35701 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn3O35701 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Matn3O35701 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Matn3O35701 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.76■□□□□ 0.27
Matn3O35701 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn3O35701 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn3O35701 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn3O35701 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn3O35701 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn3O35701 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Matn3O35701 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Matn3O35701 Gm13241-201ENSMUST00000094493 780 ntBASIC16.76■□□□□ 0.27
Matn3O35701 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn3O35701 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn3O35701 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn3O35701 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn3O35701 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.76■□□□□ 0.27
Matn3O35701 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms