Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1i3O35627 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1i3O35627 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Nr1i3O35627 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1i3O35627 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1i3O35627 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Nr1i3O35627 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Nr1i3O35627 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1i3O35627 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1i3O35627 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1i3O35627 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1i3O35627 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1i3O35627 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1i3O35627 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1i3O35627 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1i3O35627 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1i3O35627 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1i3O35627 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1i3O35627 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1i3O35627 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1i3O35627 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Nr1i3O35627 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1i3O35627 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Nr1i3O35627 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1i3O35627 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1i3O35627 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Nr1i3O35627 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.93■□□□□ 0.78
Nr1i3O35627 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1i3O35627 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1i3O35627 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1i3O35627 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.93■□□□□ 0.78
Nr1i3O35627 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1i3O35627 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1i3O35627 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1i3O35627 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.92■□□□□ 0.78
Nr1i3O35627 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1i3O35627 Gm13534-201ENSMUST00000121169 513 ntBASIC19.92■□□□□ 0.78
Nr1i3O35627 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1i3O35627 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.92■□□□□ 0.78
Nr1i3O35627 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.92■□□□□ 0.78
Nr1i3O35627 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.92■□□□□ 0.78
Nr1i3O35627 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1i3O35627 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1i3O35627 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.92■□□□□ 0.78
Nr1i3O35627 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1i3O35627 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1i3O35627 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Nr1i3O35627 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1i3O35627 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1i3O35627 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1i3O35627 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1i3O35627 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1i3O35627 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1i3O35627 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1i3O35627 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1i3O35627 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Nr1i3O35627 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.91■□□□□ 0.78
Nr1i3O35627 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1i3O35627 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1i3O35627 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.91■□□□□ 0.78
Nr1i3O35627 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1i3O35627 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1i3O35627 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Nr1i3O35627 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.91■□□□□ 0.78
Nr1i3O35627 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1i3O35627 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1i3O35627 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1i3O35627 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.9■□□□□ 0.78
Nr1i3O35627 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1i3O35627 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Nr1i3O35627 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.9■□□□□ 0.78
Nr1i3O35627 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1i3O35627 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1i3O35627 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Nr1i3O35627 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Nr1i3O35627 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Nr1i3O35627 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.89■□□□□ 0.77
Nr1i3O35627 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1i3O35627 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1i3O35627 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1i3O35627 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1i3O35627 Gm9988-201ENSMUST00000069786 435 ntBASIC19.89■□□□□ 0.77
Nr1i3O35627 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1i3O35627 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1i3O35627 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1i3O35627 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nr1i3O35627 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1i3O35627 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Nr1i3O35627 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1i3O35627 Reep4-203ENSMUST00000226563 1444 ntBASIC19.88■□□□□ 0.77
Nr1i3O35627 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
Nr1i3O35627 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1i3O35627 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1i3O35627 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Nr1i3O35627 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nr1i3O35627 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Nr1i3O35627 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1i3O35627 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.88■□□□□ 0.77
Nr1i3O35627 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1i3O35627 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms