Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Efnb3O35393 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Efnb3O35393 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.62□□□□□ -0.07
Efnb3O35393 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Efnb3O35393 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Efnb3O35393 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Efnb3O35393 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Efnb3O35393 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Efnb3O35393 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.62□□□□□ -0.07
Efnb3O35393 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Efnb3O35393 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Efnb3O35393 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Efnb3O35393 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Efnb3O35393 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Efnb3O35393 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Efnb3O35393 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Efnb3O35393 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Efnb3O35393 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Efnb3O35393 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.61□□□□□ -0.07
Efnb3O35393 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Efnb3O35393 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Efnb3O35393 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Efnb3O35393 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Efnb3O35393 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Efnb3O35393 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Efnb3O35393 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Efnb3O35393 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Efnb3O35393 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.6□□□□□ -0.07
Efnb3O35393 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Efnb3O35393 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Efnb3O35393 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Efnb3O35393 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Efnb3O35393 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.6□□□□□ -0.07
Efnb3O35393 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Efnb3O35393 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Efnb3O35393 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Efnb3O35393 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Efnb3O35393 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Efnb3O35393 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Efnb3O35393 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Efnb3O35393 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Efnb3O35393 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Efnb3O35393 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Efnb3O35393 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Efnb3O35393 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Efnb3O35393 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.59□□□□□ -0.07
Efnb3O35393 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Efnb3O35393 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Efnb3O35393 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.59□□□□□ -0.07
Efnb3O35393 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Efnb3O35393 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Efnb3O35393 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.59□□□□□ -0.07
Efnb3O35393 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Efnb3O35393 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Efnb3O35393 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Efnb3O35393 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
Efnb3O35393 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Efnb3O35393 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Efnb3O35393 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Efnb3O35393 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Efnb3O35393 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Efnb3O35393 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Efnb3O35393 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Efnb3O35393 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Efnb3O35393 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Efnb3O35393 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Efnb3O35393 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Efnb3O35393 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Efnb3O35393 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Efnb3O35393 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Efnb3O35393 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Efnb3O35393 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Efnb3O35393 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.58□□□□□ -0.08
Efnb3O35393 Gm21956-201ENSMUST00000179946 522 ntBASIC14.58□□□□□ -0.08
Efnb3O35393 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Efnb3O35393 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.58□□□□□ -0.08
Efnb3O35393 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Efnb3O35393 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Efnb3O35393 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Efnb3O35393 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.58□□□□□ -0.08
Efnb3O35393 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.58□□□□□ -0.08
Efnb3O35393 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Efnb3O35393 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.57□□□□□ -0.08
Efnb3O35393 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Efnb3O35393 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Efnb3O35393 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Efnb3O35393 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Efnb3O35393 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Efnb3O35393 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Efnb3O35393 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Efnb3O35393 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Efnb3O35393 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Efnb3O35393 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Efnb3O35393 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Efnb3O35393 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Efnb3O35393 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Efnb3O35393 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Efnb3O35393 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Efnb3O35393 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms